ggKbase home page

13_1_40cm_2_scaffold_30018

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_30018_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..287)
DNA (285bp) protein (95aa)
rng; ribonuclease G (Cytoplasmic axial filament protein) (EC:3.1.4.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribonuclease G (RNase G) (Cytoplasmic axial filament protein) id=3927606 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribonuclease G
13_1_40cm_2_scaffold_30018_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(342..1433)
DNA (1092bp) protein (364aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Rod shape-determining protein RodA id=3227259 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rod shape-determining protein RodA
13_1_40cm_2_scaffold_30018_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1433..3238)
DNA (1806bp) protein (602aa)
mrdA; penicillin-binding protein 2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cell elongation specific D,D-transpeptidase id=4317187 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mrdA; penicillin-binding protein 2
13_1_40cm_2_scaffold_30018_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3249..3737)
DNA (489bp) protein (163aa)
hypothetical protein; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4317186 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_30018_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3737..3976)
DNA (240bp) protein (80aa)
Cell shape-determining protein MreC id=4317185 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 293 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cell shape-determining protein MreC; K03570 rod shape-determining protein MreC Tax=GWA2_Rokubacteria_73_35_curated
rod shape-determining protein MreC
13_1_40cm_2_scaffold_30018_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4558..5589)
DNA (1032bp) protein (344aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cell shape determining protein, MreB/Mrl family id=3227267 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rod shape-determining protein MreB
Displaying 6 items

View Taxonomy