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13_1_40cm_2_scaffold_34102

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_34102_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..382
DNA (381bp) protein (127aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4745859 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_34102_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(664..1485)
DNA (822bp) protein (274aa)
putative phenylacetic acid degradation protein; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative phenylacetic acid degradation protein id=4527241 bin=GWF2_Methylomirabilis_70_14 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative phenylacetic acid degradation protein
13_1_40cm_2_scaffold_34102_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1517..2809)
DNA (1293bp) protein (431aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] id=14628064 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=CSP1_6_Rokubacteria
phenylacetate--CoA ligase (EC:6.2.1.30)
13_1_40cm_2_scaffold_34102_4
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2806..3108)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA91222.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_2_scaffold_34102_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3191..3451)
DNA (261bp) protein (87aa)
id=14628038 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14628038 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_34102_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3448..4608)
DNA (1161bp) protein (387aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=4745855 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_1_40cm_2_scaffold_34102_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4622..5125)
DNA (504bp) protein (168aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4745854 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_34102_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5110..5883)
DNA (774bp) protein (258aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4891635 bin=GWC2_Methylomirabilis_70_16 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tRNA-i(6)A37 thiotransferase enzyme MiaB
Displaying 8 items

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