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13_1_40cm_2_scaffold_42525

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_42525_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..1468
DNA (1467bp) protein (489aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003805964 rbh
13_1_40cm_2_scaffold_42525_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1468..1800
DNA (333bp) protein (111aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ferredoxin id=4153760 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ferredoxin
13_1_40cm_2_scaffold_42525_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1803..3500
DNA (1698bp) protein (566aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) id=14625411 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
13_1_40cm_2_scaffold_42525_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3612..4079
DNA (468bp) protein (156aa)
hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosome maturation factor RimP id=1723420 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribosome maturation protein RimP
13_1_40cm_2_scaffold_42525_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4104..5426
DNA (1323bp) protein (441aa)
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NusA antitermination factor id=1723421 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
NusA antitermination factor
13_1_40cm_2_scaffold_42525_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5423..5869
DNA (447bp) protein (149aa)
RNA-binding protein; K07742 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative nucleic-acid-binding protein implicated in transcription termination id=1723422 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_42525_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5854..6465
DNA (612bp) protein (204aa)
infB; translation initiation factor IF-2 Tax=GWA2_Rokubacteria_73_35_curated
Translation initiation factor IF-2 id=1723423 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infB; translation initiation factor IF-2
Displaying 7 items

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