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13_1_40cm_2_scaffold_43956

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_43956_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..146)
DNA (144bp) protein (48aa)
glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase id=4756400 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_43956_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(262..1572)
DNA (1311bp) protein (437aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
nucleotide sugar dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Nucleotide-sugar dehydrogenase id=4811707 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
13_1_40cm_2_scaffold_43956_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1569..2462)
DNA (894bp) protein (298aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DegT/DnrJ/EryC1/StrS family protein id=14627076 bin=bin7_NC10_sister species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_43956_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2437..4824)
DNA (2388bp) protein (796aa)
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
organic solvent tolerance protein; K04744 LPS-assembly protein id=14627077 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
organic solvent tolerance protein
13_1_40cm_2_scaffold_43956_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4845..6155)
DNA (1311bp) protein (437aa)
folyl-polyglutamate synthetase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FolC bifunctional protein id=4811710 bin=GWC2_Methylomirabilis_70_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_1_40cm_2_scaffold_43956_6
unknown

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comp(6319..6396)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 6 items

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