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13_1_40cm_2_scaffold_4540

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4540_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..843)
DNA (843bp) protein (281aa)
Phosphate/sulphate permease id=2317444 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=GWA2_Rokubacteria_73_35_curated
phosphate/sulphate permease
13_1_40cm_2_scaffold_4540_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(863..1480)
DNA (618bp) protein (206aa)
Putative phosphate transport regulator id=2317445 bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate transport regulator; K07220 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
phosphate transport regulator
13_1_40cm_2_scaffold_4540_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1500..2384)
DNA (885bp) protein (295aa)
ureD; urease accessory protein ureD; K03190 urease accessory protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Urease accessory protein UreD id=2317446 bin=GWA2_Methylomirabilis_73_35 species=Gordonia neofelifaecis genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
urease accessory protein ureD
13_1_40cm_2_scaffold_4540_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2329..2964)
DNA (636bp) protein (212aa)
Urease accessory protein UreG id=2317447 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ureG; urease accessory protein UreG; K03189 urease accessory protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ureG; urease accessory protein UreG
13_1_40cm_2_scaffold_4540_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2961..3653)
DNA (693bp) protein (231aa)
Urease accessory protein UreF id=2317448 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Urease accessory protein UreF; K03188 urease accessory protein Tax=GWA2_Rokubacteria_73_35_curated
Urease accessory protein UreF
13_1_40cm_2_scaffold_4540_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3643..4089)
DNA (447bp) protein (149aa)
ureE; urease accessory protein ureE; K03187 urease accessory protein Tax=GWA2_Rokubacteria_73_35_curated
Urease accessory protein ureE id=2317449 bin=GWA2_Methylomirabilis_73_35 species=Deinococcus gobiensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureE; urease accessory protein ureE
13_1_40cm_2_scaffold_4540_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4245..5963)
DNA (1719bp) protein (573aa)
urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] id=14625796 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10 rbh
urease subunit alpha
13_1_40cm_2_scaffold_4540_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5960..6313)
DNA (354bp) protein (118aa)
urease subunit beta (EC:3.5.1.5); K01429 urease subunit beta [EC:3.5.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
urease subunit beta (EC:3.5.1.5)
Urease subunit beta id=3784203 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4540_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6300..6839)
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRE0_ROSCS
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABU60136.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseif
13_1_40cm_2_scaffold_4540_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6850..7119)
DNA (270bp) protein (90aa)
ureA; urease subunit gamma (EC:3.5.1.5); K01430 urease subunit gamma [EC:3.5.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
urease subunit gamma (EC:3.5.1.5); K01430 urease subunit gamma [EC:3.5.1.5] id=14625794 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ureA; urease gamma subunit UreA (EC:3.5.1.5)
13_1_40cm_2_scaffold_4540_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7896..8669)
DNA (774bp) protein (258aa)
urea ABC transporter ATPase UrtD id=14625792 bin=bin7_NC10_sister species=Cycloclasticus sp. PY97M genus=Cycloclasticus taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
urea ABC transporter ATPase UrtD Tax=CSP1_6_Rokubacteria
urea ABC transporter ATP-binding protein UrtD
13_1_40cm_2_scaffold_4540_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8673..9275)
DNA (603bp) protein (201aa)
urea ABC transporter permease UrtC; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
urea ABC transporter permease UrtC; K01998 branched-chain amino acid transport system permease protein id=14625791 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
urea ABC transporter permease UrtC
Displaying 12 items

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