ggKbase home page

13_1_40cm_2_scaffold_47806

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_47806_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..185)
DNA (183bp) protein (61aa)
Thioesterase superfamily protein id=5020384 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_2_scaffold_47806_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

199..1368
DNA (1170bp) protein (390aa)
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member id=4165967 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
13_1_40cm_2_scaffold_47806_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1555..2094
DNA (540bp) protein (180aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=5020386 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_47806_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2099..3043
DNA (945bp) protein (315aa)
26S proteasome subunit P45 family (EC:3.6.4.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
26S proteasome subunit P45 family (EC:3.6.4.3)
Proteasome-activating nucleotidase id=4165965 bin=GWF2_Methylomirabilis_70_14 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_47806_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3049..3450
DNA (402bp) protein (134aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4830683 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
4-hydroxybenzoyl-CoA thioesterase
13_1_40cm_2_scaffold_47806_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3653..4384
DNA (732bp) protein (244aa)
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter id=14626741 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter
Displaying 6 items

View Taxonomy