name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_2_scaffold_5729_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(1..1527)
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mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA mismatch repair protein MutL id=4430852 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
mutL; DNA mismatch repair protein
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13_1_40cm_2_scaffold_5729_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(1604..4210)
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mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA mismatch repair protein MutS id=4430853 bin=GWC2_Methylomirabilis_70_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutS
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13_1_40cm_2_scaffold_5729_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(4233..4688)
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histidine triad (HIT) protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidine triad (HIT) protein id=3360718 bin=GWA2_Methylomirabilis_73_35 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
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13_1_40cm_2_scaffold_5729_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(4732..5007)
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hupA1; DNA-binding protein HU 1; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integration host factor, beta subunit, putative id=3360720 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hupA1; DNA-binding protein HU 1
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13_1_40cm_2_scaffold_5729_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(5294..6163)
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Signal peptide peptidase SppA, 36K type (EC:3.1.3.26) Tax=GWA2_Rokubacteria_73_35_curated
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-)
Peptidase S49, putative signal peptide peptidase SppA id=4143290 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
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13_1_40cm_2_scaffold_5729_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(6183..7895)
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rpsA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S1 id=4941223 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpsA; 30S ribosomal protein S1
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13_1_40cm_2_scaffold_5729_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(7948..8646)
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cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase id=14627233 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
1-acyl-sn-glycerol-3-phosphate acyltransferase
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13_1_40cm_2_scaffold_5729_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(8856..9569)
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cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase id=4430859 bin=GWC2_Methylomirabilis_70_24 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
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13_1_40cm_2_scaffold_5729_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(9566..10879)
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3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] id=14627231 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-phosphoshikimate 1-carboxyvinyltransferase
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13_1_40cm_2_scaffold_5729_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(10876..11724)
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prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] id=14627230 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
prephenate dehydrogenase
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13_1_40cm_2_scaffold_5729_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(11721..12833)
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hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase id=4143296 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
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13_1_40cm_2_scaffold_5729_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(12843..13904)
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chorismate mutase (EC:4.2.1.51)
pheA; chorismate mutase/prephenate dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chorismate mutase/prephenate dehydratase id=3333763 bin=GWA2_Methylomirabilis_73_35 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
|
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13_1_40cm_2_scaffold_5729_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(13974..14618)
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pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Pseudouridine synthase id=3333767 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pseudouridine synthase
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13_1_40cm_2_scaffold_5729_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(14656..15177)
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scpB; Segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Segregation and condensation protein B id=3333773 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
scpB; segregation and condensation protein B
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13_1_40cm_2_scaffold_5729_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(15957..16427)
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trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) id=3333940 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_2_scaffold_5729_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(16900..17655)
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family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase family 2 id=3333943 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
family 2 glycosyl transferase
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13_1_40cm_2_scaffold_5729_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(17907..19013)
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ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=GWA2_Rokubacteria_73_35_curated
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] id=14627222 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
ADP-heptose--LPS heptosyltransferase
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13_1_40cm_2_scaffold_5729_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(19010..19474)
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cytidyltransferase-related domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytidyltransferase-related domain protein id=3333947 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytidyltransferase-related domain-containing protein
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13_1_40cm_2_scaffold_5729_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(19485..20495)
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D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PfkB domain protein id=3956926 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
D-beta-D-heptose 7-phosphate kinase
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13_1_40cm_2_scaffold_5729_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(20492..21073)
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histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=GWA2_Rokubacteria_73_35
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase id=3956928 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_2_scaffold_5729_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(21105..22217)
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group 1 glycosyl transferase; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=3956931 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase, group 1
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13_1_40cm_2_scaffold_5729_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(23415..24539)
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putative phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Phosphatidylinositol alpha-mannosyltransferase id=3956937 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
group 1 glycosyl transferase
|
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13_1_40cm_2_scaffold_5729_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(24536..25642)
|
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=3956940 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
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13_1_40cm_2_scaffold_5729_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(25639..26634)
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ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-) Tax=GWA2_Rokubacteria_73_35_curated
ADP-heptose--LPS heptosyltransferase II (Modular protein) id=3956942 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
lipopolysaccharide heptosyltransferase II
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13_1_40cm_2_scaffold_5729_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(26631..27722)
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tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase id=3956947 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_2_scaffold_5729_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(27719..27862)
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kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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