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13_1_40cm_2_scaffold_6128

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6128_1
unknown

Not on your lists

comp(3..821)
DNA (819bp) protein (273aa)

This feature has no annotations

13_1_40cm_2_scaffold_6128_2
unknown

Not on your lists

995..1318
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_2_scaffold_6128_3
unknown

Not on your lists

comp(1356..1553)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_2_scaffold_6128_4
unknown

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2794..2985
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_2_scaffold_6128_5
unknown

Not on your lists

3837..4031
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_2_scaffold_6128_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4053..4979)
DNA (927bp) protein (309aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_6128_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4976..5308)
DNA (333bp) protein (111aa)
carboxymuconolactone decarboxylase (EC:1.11.1.15) Tax=GWA2_Rokubacteria_73_35_curated
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Carboxymuconolactone decarboxylase id=3352295 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_6128_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5331..6134)
DNA (804bp) protein (268aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=2521453 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_1_40cm_2_scaffold_6128_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6224..6979
DNA (756bp) protein (252aa)
beta-lactamase class B Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
beta-lactamase class B id=14627174 bin=bin7_NC10_sister species=Amycolatopsis balhimycina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
putative Zn-dependent hydrolase
13_1_40cm_2_scaffold_6128_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7105..8061
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D0251
cyclase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cyclase
13_1_40cm_2_scaffold_6128_11
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8061..8837
DNA (777bp) protein (259aa)
Extracellular solute-binding protein family 1 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NFD9_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EGO65264.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonem
molybdate ABC transporter periplasmic protein
13_1_40cm_2_scaffold_6128_12
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8935..10575)
DNA (1641bp) protein (547aa)
Amidase n=1 Tax=Geobacillus kaustophilus GBlys RepID=U2X652_GEOKU rbh
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase {ECO:0000313|EMBL:AHY46237.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; R
13_1_40cm_2_scaffold_6128_13
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10572..11042)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XQB4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ33216.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
13_1_40cm_2_scaffold_6128_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11199..12515
DNA (1317bp) protein (439aa)
aminotransferase class-III; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWA2_Rokubacteria_73_35_curated
Glutamate-1-semialdehyde 2,1-aminomutase id=3222459 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminotransferase class-III
13_1_40cm_2_scaffold_6128_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12600..13100
DNA (501bp) protein (167aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hypothetical membrane protein id=3950581 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_6128_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13097..13582
DNA (486bp) protein (162aa)
putative competence-damaged protein, CinA like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Competence/damage-inducible protein cinA id=4829158 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
competence/damage-inducible protein cinA
Displaying 16 items

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