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13_1_40cm_2_scaffold_61508

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_61508_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..182)
DNA (180bp) protein (60aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Nucleoside-diphosphate-sugar epimerases id=2575368 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_61508_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(241..675)
DNA (435bp) protein (145aa)
glycosyl transferase family protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=2575382 bin=GWA2_Methylomirabilis_73_35 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_1_40cm_2_scaffold_61508_3
unknown

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1035..1361
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_2_scaffold_61508_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1310..1681)
DNA (372bp) protein (124aa)
Cupin domain-containing protein id=2575386 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium mesophilicum genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_61508_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1755..3221
DNA (1467bp) protein (489aa)
Microcystin LR degradation protein MlrC-like protein id=2575387 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
microcystin LR degradation protein MlrC-like protein Tax=GWA2_Rokubacteria_73_35_curated
MlrC C-terminus family
13_1_40cm_2_scaffold_61508_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3246..3875
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UPF0637 protein HMPREF1013_00496 id=4622868 bin=GWC2_Methylomirabilis_70_24 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_61508_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3878..4525
DNA (648bp) protein (216aa)
HAD family hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Beta-phosphoglucomutase id=4367563 bin=GWA2_Methylomirabilis_73_35 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD family hydrolase
13_1_40cm_2_scaffold_61508_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4513..5115
DNA (603bp) protein (201aa)
Thiol methyltransferase 1-like id=4367562 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus elongatus genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol methyltransferase 1-like protein Tax=GWA2_Rokubacteria_73_35_curated
thiol methyltransferase 1
13_1_40cm_2_scaffold_61508_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6053..6433
DNA (381bp) protein (127aa)
ABC transporter ATP-binding protein id=4851617 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_61508_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6907..7164
DNA (258bp) protein (86aa)
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter ATP-binding protein id=3784112 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_61508_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7167..7871
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein id=14627657 bin=bin7_NC10_sister species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_61508_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7868..8734
DNA (867bp) protein (289aa)
ABC transporter permease id=3784117 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter permease
13_1_40cm_2_scaffold_61508_13
unknown

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comp(9222..9461)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_2_scaffold_61508_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9818..10543
DNA (726bp) protein (242aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ParB domain protein nuclease id=4367561 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 14 items

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