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13_1_40cm_2_scaffold_7428

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7428_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..920
DNA (918bp) protein (306aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytochrome c oxidase, subunit I id=4464470 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c oxidase subunit III
13_1_40cm_2_scaffold_7428_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1388..2086
DNA (699bp) protein (233aa)
ctaG; putative CtaG protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative CtaG protein id=4464468 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
13_1_40cm_2_scaffold_7428_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2097..3407
DNA (1311bp) protein (437aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22) id=14625154 bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10 rbh
nucleotide sugar dehydrogenase (EC:1.1.1.22)
13_1_40cm_2_scaffold_7428_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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3456..4304
DNA (849bp) protein (283aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UDP-glucuronate decarboxylase (EC:4.1.1.35)
NAD-dependent epimerase/dehydratase id=2287859 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_7428_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4301..5296
DNA (996bp) protein (332aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWA2_Rokubacteria_73_35_curated
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase id=2287861 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_7428_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5293..5463
DNA (171bp) protein (57aa)
hypothetical protein; K09791 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2287863 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_7428_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5463..6548
DNA (1086bp) protein (362aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=GWA2_Rokubacteria_73_35_curated
Nucleotidyl transferase id=3102370 bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nucleotidyl transferase
13_1_40cm_2_scaffold_7428_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6605..8395
DNA (1791bp) protein (597aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor 4 id=4648602 bin=GWF2_Methylomirabilis_70_14 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein LepA
13_1_40cm_2_scaffold_7428_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8398..9105
DNA (708bp) protein (236aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
signal peptidase I (EC:3.4.21.89)
Signal peptidase I id=3102374 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_7428_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9198..9602
DNA (405bp) protein (135aa)
oxygen-independent coproporphyrinogen III oxidase (yggW) (EC:1.3.99.22) Tax=GWA2_Rokubacteria_73_35_curated
anaerobic coproporphyrinogen III oxidase oxidoreductase (EC:1.3.99.22)
Coproporphyrinogen III oxidase id=3102376 bin=GWC2_Methylomirabilis_70_16 species=Corynebacterium genitalium genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 10 items

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