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13_1_40cm_2_scaffold_8737

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8737_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3..683
DNA (681bp) protein (227aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Arabinose efflux permease family protein id=1866162 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces pristinaespiralis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_8737_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

680..1477
DNA (798bp) protein (266aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=GWA2_Rokubacteria_73_35_curated
Enoyl-CoA hydratase/isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVX5_ALIDB rbh
enoyl-CoA hydratase/isomerase
13_1_40cm_2_scaffold_8737_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1493..2575
DNA (1083bp) protein (361aa)
glutamine-fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glutamine-fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine-fructose-6-phosphate transaminase (Isomerizing) id=1866170 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_8737_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2612..4024)
DNA (1413bp) protein (471aa)
rhlB; ATP-dependent RNA helicase RhlB; K03732 ATP-dependent RNA helicase RhlB [EC:3.6.4.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DEAD/DEAH box helicase domain protein id=4663773 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DEAD/DEAH box helicase
13_1_40cm_2_scaffold_8737_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4025..4759)
DNA (735bp) protein (245aa)
Putative Sec-independent protein translocase protein TatC id=1866211 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Sec-independent protein translocase protein TatC Tax=GWA2_Rokubacteria_73_35_curated
Sec-independent protein translocase protein TatC
13_1_40cm_2_scaffold_8737_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4790..5578)
DNA (789bp) protein (263aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] id=14625252 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphomethylpyrimidine kinase
13_1_40cm_2_scaffold_8737_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5614..6081)
DNA (468bp) protein (156aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal RNA small subunit methyltransferase I id=4070961 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_8737_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6287..7534)
DNA (1248bp) protein (416aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX id=1866218 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_8737_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7542..8177)
DNA (636bp) protein (212aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=4942504 bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_8737_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8264..9484)
DNA (1221bp) protein (407aa)
trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
trigger factor; K03545 trigger factor id=14625256 bin=bin7_NC10_sister species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
trigger factor
13_1_40cm_2_scaffold_8737_trna_1
unknown

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comp(9518..9601)
DNA (84bp)
transferRNA
13_1_40cm_2_scaffold_8737_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9716..10666
DNA (951bp) protein (317aa)
Uncharacterized protein id=4148511 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_8737_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10659..11534)
DNA (876bp) protein (292aa)
Binding-protein-dependent transport systems inner membrane component id=3721734 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport systems inner membrane component Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_8737_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11500..12450)
DNA (951bp) protein (317aa)
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=3721810 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
binding-protein-dependent transport system inner membrane protein
13_1_40cm_2_scaffold_8737_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12472..14007)
DNA (1536bp) protein (512aa)
ABC transporter periplasmic protein id=3721812 bin=GWC2_Methylomirabilis_70_16 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
ABC transporter periplasmic protein Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter periplasmic protein
13_1_40cm_2_scaffold_8737_15
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14004..14840)
DNA (837bp) protein (279aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase id=4839861 bin=GWC2_Syntrophus__56_31 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=GWC2_Syntrophus_56_31_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_2_scaffold_8737_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15118..15948
DNA (831bp) protein (277aa)
Beta-lactamase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQZ0_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ETW97553.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
beta-lactamase-like protein
Displaying 17 items

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