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13_1_40cm_2_scaffold_9356

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_9356_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..190)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_2_scaffold_9356_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(187..1002)
DNA (816bp) protein (272aa)
hypothetical protein; K02050 NitT/TauT family transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein; K02050 NitT/TauT family transport system permease protein id=14625185 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
13_1_40cm_2_scaffold_9356_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(999..1805)
DNA (807bp) protein (269aa)
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein id=14625186 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_9356_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1871..2947)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein id=3315430 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_9356_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3074..3946
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=3315427 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_9356_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3980..4594
DNA (615bp) protein (205aa)
gmk; guanylate kinase (EC:2.7.4.8) Tax=GWA2_Rokubacteria_73_35_curated
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase id=3315421 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_9356_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4594..4809
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega
DNA-directed RNA polymerase subunit omega id=3315419 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-directed RNA polymerase subunit omega Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_9356_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4806..6026
DNA (1221bp) protein (407aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=GWA2_
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein CoaBC id=3315417 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_9356_9
unknown

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6076..6297
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_9356_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6302..6994
DNA (693bp) protein (231aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=3315415 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_9356_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6996..8381
DNA (1386bp) protein (462aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=GWA2_Rokubacteria_73_35_curated
Primosomal protein N' id=3315413 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
priA; primosomal protein N'
Displaying 11 items

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