ggKbase home page

13_1_40cm_2_scaffold_14690_5

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 3275..4210

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 306.0
  • Bit_score: 432
  • Evalue 4.40e-118
tRNA pseudouridine synthase B id=1723427 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 307.0
  • Bit_score: 432
  • Evalue 3.10e-118
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 296.0
  • Bit_score: 231
  • Evalue 3.00e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGAGCGTCAGGGTCGGCGGCTCGGGCGTGCTCGCGGTCAACAAGGCGGCGGGGGCGACGTCGTTCGACGTCGTGGCGCTCGTCCGTCGGCGGCTCCACGTCCGCCGGGTCGGTCACGCCGGCACGCTCGACCCCGCGGCGACGGGCGTCCTACCAGTCCTGATCGGCGAGGCGACCAAGCTCACGCCGTACCTCATGGACCAAGACAAGGAGTACGTCGCGACGGTCCGCTTCGGGCTCACGACCGACACTCACGACACCGAGGGTCGCGTCCTCTCGGAGGTCACGGTCTCCCGACTCGAGCGGCGCGACCTCGAGGAGGCGAGCCGGCCGTTCGTCGGTCGGATCAAGCAGATCCCGCCCATGTACTCGGCGGTCCACCACGAGGGGCGGCGCCTCTACGAGCTGGCGCGCGAGGGGATCGAGGTCGACCGCGAGCCGCGGGAAGTCGTCGTCCATTCGATCGCCGTCGACGAGGTCGCCCCGCCTCGGGCCACCCTCCGTGTCGTCTGCGGCAAGGGCACGTACGTGCGGGTGCTCGCCGCCGACCTGGGGGCCGCGCTCGGCTACGGCGGCGCCGTCGAGTGCCTCGTCAGGTGTCGTGTCGGCCCCTTCCACCTCGCCGACGCGATCCCCTGGGCCGACGTCGTCAGCGCCGAGCCGGCAGTGCTCTGGTCTCGCGTCACGCCGCCGGAGTCGGCGTTGGCGGGCTGGCAAGGGGTGACCCTCGACGAGCGCGCGGCCGTCGCGTTCGGGCACGGCCAGGCGGTCGAGGTCCGGGCACCCGCGCGCGGCGAGGGCGGCTCCTCCGTCCGCGTCCACGACGTCACCGGTACGCTCATCGGCGTCGGCGCGATCACGGAGGACGGGCGCCGCGTGAAACCCGTCCGAATCCTGCATGCGGATCGTCCGGGGACTCGAATCCTACCCGCCTGA
PROTEIN sequence
Length: 312
VSVRVGGSGVLAVNKAAGATSFDVVALVRRRLHVRRVGHAGTLDPAATGVLPVLIGEATKLTPYLMDQDKEYVATVRFGLTTDTHDTEGRVLSEVTVSRLERRDLEEASRPFVGRIKQIPPMYSAVHHEGRRLYELAREGIEVDREPREVVVHSIAVDEVAPPRATLRVVCGKGTYVRVLAADLGAALGYGGAVECLVRCRVGPFHLADAIPWADVVSAEPAVLWSRVTPPESALAGWQGVTLDERAAVAFGHGQAVEVRAPARGEGGSSVRVHDVTGTLIGVGAITEDGRRVKPVRILHADRPGTRILPA*