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13_1_40cm_2_scaffold_14690

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_14690_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..1608
DNA (1608bp) protein (536aa)
infB; translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Translation initiation factor IF-2 id=1723423 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infB; translation initiation factor IF-2
13_1_40cm_2_scaffold_14690_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1631..1921
DNA (291bp) protein (97aa)
infB; translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=1723424 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_14690_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1921..2274
DNA (354bp) protein (118aa)
ribosome-binding factor A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosome-binding factor A id=1723425 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribosome-binding factor A
13_1_40cm_2_scaffold_14690_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2271..3278
DNA (1008bp) protein (336aa)
exopolyphosphatase-related proteins; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Exopolyphosphatase-like enzyme id=1723426 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
exopolyphosphatase-related proteins
13_1_40cm_2_scaffold_14690_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3275..4210
DNA (936bp) protein (312aa)
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWA2_Rokubacteria_73_35_curated
tRNA pseudouridine synthase B id=1723427 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA pseudouridine synthase B
13_1_40cm_2_scaffold_14690_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4173..5090
DNA (918bp) protein (306aa)
FMN adenylyltransferase; riboflavin kinase (EC:2.7.7.2 2.7.1.26); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FMN adenylyltransferase; riboflavin kinase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF id=1723429 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_14690_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5218..5487
DNA (270bp) protein (90aa)
30S ribosomal protein S15 id=1723473 bin=GWA2_Methylomirabilis_73_35 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
30S ribosomal protein S15
13_1_40cm_2_scaffold_14690_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5558..7489
DNA (1932bp) protein (644aa)
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) id=14625422 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8)
13_1_40cm_2_scaffold_14690_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7432..7641
DNA (210bp) protein (70aa)
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Polyribonucleotide nucleotidyltransferase id=4153826 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polynucleotide phosphorylase
13_1_40cm_2_scaffold_14690_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7654..8916
DNA (1263bp) protein (421aa)
ymxG; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative enzyme id=4153827 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium 98 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M16-like protein
13_1_40cm_2_scaffold_14690_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9154..10452
DNA (1299bp) protein (433aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=14625424 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
adenylosuccinate lyase (EC:4.3.2.2)
13_1_40cm_2_scaffold_14690_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

10449..11162
DNA (714bp) protein (238aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=2306169 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 12 items

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