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13_1_40cm_2_scaffold_4832_1

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 2..532

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=4554990 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 179.0
  • Bit_score: 229
  • Evalue 2.30e-57
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 178.0
  • Bit_score: 229
  • Evalue 3.20e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 156.0
  • Bit_score: 115
  • Evalue 1.30e-23

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 531
GGGATGGACGCAGAAGGCTTCGATACCCTGGTGGCGACGCACCACCGGGAGATCTATCGCTACCTCGTCCGGGCTACGTTCCGGGCCAGCGAGGCGGACGATCTCGCCCAGGAGACCTTCCTCCGCGCCTACCGCGCCCACCGGGCGCTCCCCCCCGACGCGAACGCACGCGCCTGGCTGTTCGCCATCGCGAGCAACGTCGCGAAGAACCACTTCCGCGCCGAGTCCCGTCGCCGCCGGGCTCACACCGGGGTGAGGGAGATCCGCATCGAGACCGACGGGGCGGGACCCGAGGGCGAGACGCTGTTCAAAGAGGCCCGGACCGTGCTCGACACCGTCGTCGCCGGATTGCCGCTCAAGCAGCGCCTCGCGTTCACCCTTCGGAAGGTCCACGACCTCGACTACGACGCCATCGGCCGGAGCCTCGCCTGCTCCCCGGACAGCGCGCGGGCCCACGTGTTCCAGGCCCTCCGCAAGATCCGTCGGAGCCTGAACGGGTACGAGCTGCCGGTGGGGAGAGACGAGCGATGA
PROTEIN sequence
Length: 177
GMDAEGFDTLVATHHREIYRYLVRATFRASEADDLAQETFLRAYRAHRALPPDANARAWLFAIASNVAKNHFRAESRRRRAHTGVREIRIETDGAGPEGETLFKEARTVLDTVVAGLPLKQRLAFTLRKVHDLDYDAIGRSLACSPDSARAHVFQALRKIRRSLNGYELPVGRDER*