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13_1_40cm_2_scaffold_4832

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4832_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..532
DNA (531bp) protein (177aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=4554990 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_2_scaffold_4832_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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529..1491
DNA (963bp) protein (321aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=GWA2_Rokubacteria_73_35_curated
Methylated-DNA--protein-cysteine methyltransferase id=4554993 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
methylated-DNA--protein-cysteine methyltransferase
13_1_40cm_2_scaffold_4832_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1528..1905
DNA (378bp) protein (126aa)
id=4554997 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4441128 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4832_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2074..3555)
DNA (1482bp) protein (494aa)
beta-N-acetylglucosaminidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative beta-N-acetylglucosaminidase id=4485808 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
beta-N-acetylglucosaminidase
13_1_40cm_2_scaffold_4832_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3811..4281
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003764836
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_2_scaffold_4832_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4372..4734
DNA (363bp) protein (121aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3431004 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4832_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4741..5913)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterised conserved protein UCP016719 id=4485812 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_4832_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5941..6969
DNA (1029bp) protein (343aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=GWA2_Rokubacteria_73_35_curated
N-acetylmuramic acid 6-phosphate etherase id=3431007 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
N-acetylmuramic acid 6-phosphate etherase
13_1_40cm_2_scaffold_4832_9

Not on your lists

7610..8872
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8I6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ08895.1}; TaxID=455550 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG5H11.;"
13_1_40cm_2_scaffold_4832_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8888..9586
DNA (699bp) protein (233aa)
Uncharacterized protein id=3068161 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM50 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR Tax=GWC2_Rokubacteria_70_16_curated
dehydrogenase
Displaying 10 items

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