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13_1_40cm_2_scaffold_7917_3

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 2138..3334

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 399.0
  • Bit_score: 638
  • Evalue 8.80e-180
Extracellular ligand-binding receptor id=4973968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 401.0
  • Bit_score: 626
  • Evalue 2.50e-176
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 383.0
  • Bit_score: 439
  • Evalue 9.20e-121

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGATCCGCAACCCCGTCCGTCTCACGCTCACGCTCTTGGCCGCGTTGACCCTGGTGGCACTGCCGGGCGCGTCGAACCTGGCCGCCCAGGGTAGCAAAGGCACGATCAAGATCGCCACCCAGAGCCCGCTCAGCGGCGGCCAGGCAGCTCTCGGGGAGGGCATCAAGCTCGGCGCCCAGCTCGCCATCGAGAAGTTCAGGGGCAACCTCACGAAGATGGGCTACAAGGTCGATCTGGTGCCGTTCGACGATCAGGCCAAGCCGGACGTCGGCGTGGCGAATGCGAAGAACATCATCGCGGACAAGGACATTCTCGCCGTCATCGGCCATCTCAACTCGGGAGTCGCCATCCCCTCGTCCGAGGTCTACAAAGAAGTCAGTGTCGCGATGATCTCGCCCGCCAACACCAACCCGGTGGTCACCGACCGCGGCTACCCGAACGTCAACCGGGTGTGCGGCCGAGACGACGTCCAGGGCGTGGTCGGCTCCGAATTCGCCAACGGGACGATGAAGGCCAAGTCGGTGTACATCATCCATGACAAGACGCAGTACGGCCAGGGCGTGGCCGAGTTCTTCAAAGCCGATGCGGAGAAGAAGGGCATCAAGGTCCTCGGCTTCGAGGGCACAGAGGAGAAGTCGAACTTCGACCCCATCATCACCCCGATCAAGGCGAAGAATCCGAACGTCATCTACTTCGGCGGCATCTACGACCAGGCGGCGCCGTTCTTCAAGCAGACCCGGGAGAAGGGCGTGAAGTCGAAGTTCCTGGGCCCCGACGGCATGGACTCCTCCGACCTGACGAAGATCGCCGGCAAAGCCGTCGTCGGGATGTACTACACCTCGGCCGCCGGCCCGGCCTCGGCCCTGCCCAAGGCCAAGGCCTTCGTCGAGGACTTCAAGAAGAAGTTCGGCAAGAACCCCGAGCCGTACGCCGCCGAGGCCTACGATGCGACCGCCATCGCGCTCAAGGCCATCGAAGCCGCGGCCAAGAGCGGCAAGCTGAGTCGCGAGGACGTGGCGACGGCGGTCCGGAAGGTGAAGCACAGCGGCATCACCGGCGAGATCGAGTTCGACACGAAGGGTGACCGGAAGAAGGCGCTCTACTTCGTGCTGCAGGTCGCCAGCGACGACCCGGCGAAGTGGGGCGACAACAAGATCGTCAAGCAGCTGACCATCGCCCCGCCCGAAAAGAAGTAG
PROTEIN sequence
Length: 399
MIRNPVRLTLTLLAALTLVALPGASNLAAQGSKGTIKIATQSPLSGGQAALGEGIKLGAQLAIEKFRGNLTKMGYKVDLVPFDDQAKPDVGVANAKNIIADKDILAVIGHLNSGVAIPSSEVYKEVSVAMISPANTNPVVTDRGYPNVNRVCGRDDVQGVVGSEFANGTMKAKSVYIIHDKTQYGQGVAEFFKADAEKKGIKVLGFEGTEEKSNFDPIITPIKAKNPNVIYFGGIYDQAAPFFKQTREKGVKSKFLGPDGMDSSDLTKIAGKAVVGMYYTSAAGPASALPKAKAFVEDFKKKFGKNPEPYAAEAYDATAIALKAIEAAAKSGKLSREDVATAVRKVKHSGITGEIEFDTKGDRKKALYFVLQVASDDPAKWGDNKIVKQLTIAPPEKK*