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13_1_40cm_2_scaffold_7917

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7917_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2..1444
DNA (1443bp) protein (481aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acetyl-CoA carboxylase, biotin carboxylase (EC:6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase id=4973966 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_7917_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1444..2091
DNA (648bp) protein (216aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
hydroxyethylthiazole kinase and thiamine-phosphate pyrophosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Thiamine-phosphate synthase id=4614178 bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_7917_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2138..3334
DNA (1197bp) protein (399aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Extracellular ligand-binding receptor id=4973968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor
13_1_40cm_2_scaffold_7917_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3496..4467
DNA (972bp) protein (324aa)
Inner-membrane translocator id=4973970 bin=GWA2_Methylomirabilis_73_35 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_2_scaffold_7917_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4464..5666
DNA (1203bp) protein (401aa)
Inner-membrane translocator id=4973971 bin=GWA2_Methylomirabilis_73_35 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_1_40cm_2_scaffold_7917_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5667..6458
DNA (792bp) protein (264aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related id=4973972 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter-like protein
13_1_40cm_2_scaffold_7917_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6451..7152
DNA (702bp) protein (234aa)
ABC transporter related protein id=4973973 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter
13_1_40cm_2_scaffold_7917_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7137..8801)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60114.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_40cm_2_scaffold_7917_9
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8798..10279)
DNA (1482bp) protein (494aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
Glycosyl transferase family 2 id=2907808 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glycosyl transferase family protein
13_1_40cm_2_scaffold_7917_10
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10276..11058)
DNA (783bp) protein (261aa)
NDP-hexose 3-C-methyltransferase TylCIII id=2520603 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
NDP-hexose 3-C-methyltransferase TylCIII Tax=RBG_16_Deltaproteobacteria_58_17_curated
C-methyltransferase
Displaying 10 items

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