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13_1_20CM_4_Cyanobacteria_61_6

13_1_20CM_4_Bacteria_61_6
In projects: 13_1_20CM_4  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 6.14 Longest contig: 9.28 Kbp Bin length: 5.76 Mbp GC content: 60.73 %
Contigs count: 3730 Features count: 6540 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1

Description

All Cyanos. <1 partial genome-CB

Displaying items 451-500 of 3730 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_232170
Species: Parcubacteria bacterium GW2011_GWD2_40_9 (50%)
2 1099 bp 58.42 7.08 99.36
13_1_20cm_4_scaffold_256363
Species: Nostoc sp. PCC 7107 (100%)
2 1030 bp 57.09 2.68 99.03
13_1_20cm_4_scaffold_142084
Species: Fulvivirga imtechensis (50%)
2 1393 bp 52.62 4.87 100.14
13_1_20cm_4_scaffold_99887
Species: CG_Anaero_02 (50%)
2 1625 bp 57.85 4.02 89.17
13_1_20cm_4_scaffold_124344
Species: RBG_16_Actinobacteria_68_12_curated (50%)
2 1479 bp 67.07 4.92 67.75
13_1_20cm_4_scaffold_59797
Species: Oscillatoria nigro-viridis (50%)
2 2022 bp 58.26 3.60 101.04
13_1_20cm_4_scaffold_74541
Species: Gloeobacter violaceus (50%)
2 1840 bp 52.88 3.96 97.99
13_1_20cm_4_scaffold_222726
Species: Tolypothrix bouteillei (50%)
2 1126 bp 58.35 2.67 93.52
13_1_20cm_4_scaffold_119969
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1502 bp 56.72 3.51 99.27
13_1_20cm_4_scaffold_186323
Species: Sorangium cellulosum (50%)
2 1234 bp 60.78 2.24 99.19
13_1_20cm_4_scaffold_129898
Species: RBG_16_Chloroflexi_54_18_curated (50%)
2 1450 bp 66.97 21.64 99.52
13_1_20cm_4_scaffold_67861
Species: Gloeobacter kilaueensis (50%)
2 1918 bp 63.66 4.58 86.18
13_1_20cm_4_scaffold_204063
Species: Crinalium epipsammum (50%)
2 1182 bp 65.23 3.40 38.58
13_1_20cm_4_scaffold_267425
Species: Acaryochloris marina (50%)
2 1002 bp 66.77 4.26 97.60
13_1_20cm_4_scaffold_156141
Species: Pyrinomonas methylaliphatogenes (50%)
2 1336 bp 54.27 5.26 74.55
13_1_20cm_4_scaffold_32616
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 2614 bp 59.18 5.76 100.08
13_1_20cm_4_scaffold_230791
Species: Calothrix sp. PCC 7507 (50%)
2 1103 bp 65.00 2.73 97.91
13_1_20cm_4_scaffold_65327
Species: R_Acidobacteria_65_29 (50%)
2 1948 bp 54.83 3.35 91.79
13_1_20cm_4_scaffold_74312
Species: Hyalangium minutum (50%)
2 1843 bp 66.68 8.99 100.11
13_1_20cm_4_scaffold_202912
Species: Pyrinomonas methylaliphatogenes (100%)
2 1185 bp 68.35 17.79 99.75
13_1_20cm_4_scaffold_221806
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1129 bp 61.38 4.00 100.18
13_1_20cm_4_scaffold_163515
Species: Scytonema millei (50%)
2 1309 bp 70.44 4.22 86.86
13_1_20cm_4_scaffold_247150
Species: RLO_RIF02_62_27 (50%)
2 1056 bp 54.64 6.18 100.57
13_1_20cm_4_scaffold_67171
Species: R_Betaproteobacteria_64_14 (50%)
2 1926 bp 67.13 5.47 65.11
13_1_20cm_4_scaffold_192546
Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)
2 1216 bp 63.65 8.67 100.16
13_1_20cm_4_scaffold_139323
Species: Calothrix sp. PCC 7507 (50%)
2 1406 bp 65.86 5.71 99.86
13_1_20cm_4_scaffold_261666
Species: [Oscillatoria] sp. PCC 6506 (50%)
2 1017 bp 60.18 7.65 104.72
13_1_20cm_4_scaffold_103611
Species: BJP_IG2069_Chloroflexi_70_12 (50%)
2 1599 bp 70.42 5.81 92.87
13_1_20cm_4_scaffold_45745
Species: Chroococcidiopsis thermalis (50%)
2 3336 bp 56.24 6.85 87.41
13_1_20cm_4_scaffold_231484
Species: Gloeobacter kilaueensis (50%)
2 1101 bp 58.95 2.05 99.18
13_1_20cm_4_scaffold_56574
Species: Gloeobacter kilaueensis (50%)
2 2071 bp 56.78 2.67 97.34
13_1_20cm_4_scaffold_244617
Species: Pyrinomonas methylaliphatogenes (50%)
2 1063 bp 59.36 4.01 100.19
13_1_20cm_4_scaffold_113981
Species: R_Dadabacteria_53_21 (50%)
2 1535 bp 52.12 6.38 71.73
13_1_20cm_4_scaffold_242083
Species: GWC2_Nitrospirae_42_7_curated (50%)
2 1070 bp 53.83 4.46 78.50
13_1_20cm_4_scaffold_184484
Species: Cyanothece sp. PCC 7424 (50%)
2 1240 bp 55.48 3.85 92.18
13_1_20cm_4_scaffold_71781
Species: Scytonema tolypothrichoides (50%)
2 1872 bp 53.31 3.35 98.08
13_1_20cm_4_scaffold_144163
Species: GWF2_Verrucomicrobia_62_7_curated (50%)
2 1384 bp 51.73 3.81 92.56
13_1_20cm_4_scaffold_27529
Species: Candidatus Magnetobacterium bavaricum (50%)
2 2809 bp 58.88 5.00 92.81
13_1_20cm_4_scaffold_213976
Species: Verrucomicrobiae bacterium DG1235 (50%)
2 1153 bp 59.15 3.05 99.91
13_1_20cm_4_scaffold_155454
Species: Roseiflexus castenholzii (50%)
2 1339 bp 63.70 14.06 86.93
13_1_20cm_4_scaffold_165130
Species: RLO_Verrucomicrobia_64_8 (50%)
2 1303 bp 53.65 3.08 81.04
13_1_20cm_4_scaffold_55654
Species: RBG_16_Euryarchaeota_67_27_curated (100%)
2 2086 bp 61.17 15.40 93.91
13_1_20cm_4_scaffold_248075
Species: Gloeobacter kilaueensis (50%)
2 1053 bp 56.60 3.34 100.29
13_1_20cm_4_scaffold_67635
Species: R_Acidobacteria_65_29 (50%)
2 1920 bp 68.28 4.18 100.16
13_1_20cm_4_scaffold_69017
Species: Pyrinomonas methylaliphatogenes (50%)
2 1904 bp 53.68 6.46 78.62
13_1_20cm_4_scaffold_143011
Species: Cystobacter violaceus (50%)
2 1389 bp 53.49 4.88 98.70
13_1_20cm_4_scaffold_88833
Species: RBG_13_Caldithrix_44_9_curated (50%)
2 1708 bp 70.14 54.52 91.69
13_1_20cm_4_scaffold_60723
Species: Pleurocapsa minor (50%)
2 2009 bp 54.26 5.75 80.94
13_1_20cm_4_scaffold_252222
Species: BJP_IG2102_BRC1_58_13 (50%)
2 1042 bp 59.21 3.13 51.25
13_1_20cm_4_scaffold_138636
Species: mine drainage metagenome (50%)
2 1409 bp 57.20 3.38 95.17
Displaying items 451-500 of 3730 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.