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13_1_20CM_4_Cyanobacteria_61_6

13_1_20CM_4_Bacteria_61_6
In projects: 13_1_20CM_4  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 6.14 Longest contig: 9.28 Kbp Bin length: 5.76 Mbp GC content: 60.73 %
Contigs count: 3730 Features count: 6540 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1

Description

All Cyanos. <1 partial genome-CB

Displaying items 501-550 of 3730 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_77774
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1808 bp 55.37 3.19 99.39
13_1_20cm_4_scaffold_100159
Species: Chloracidobacterium thermophilum (50%)
2 1623 bp 56.13 4.95 99.63
13_1_20cm_4_scaffold_102232
Species: Hassallia byssoidea (50%)
2 1609 bp 54.63 5.77 85.58
13_1_20cm_4_scaffold_165594
Species: Rhodovulum sulfidophilum (50%)
2 1302 bp 71.12 4.24 100.00
13_1_20cm_4_scaffold_167206
Species: Gloeocapsa sp. PCC 7428 (50%)
2 1296 bp 70.99 8.13 93.06
13_1_20cm_4_scaffold_114675
Species: Gloeobacter kilaueensis (50%)
2 1532 bp 73.24 5.73 96.93
13_1_20cm_4_scaffold_175962
Species: RBG_16_Zixibacteria_50_21_curated (50%)
2 1268 bp 69.48 2.97 97.95
13_1_20cm_4_scaffold_249229
Species: GWA2_Deltaproteobacteria_45_12_curated (50%)
2 1050 bp 54.19 4.30 84.00
13_1_20cm_4_scaffold_75931
Species: Gloeobacter violaceus (50%)
2 1826 bp 56.90 3.99 95.13
13_1_20cm_4_scaffold_230336
Species: Gloeobacter violaceus (50%)
2 1104 bp 69.29 4.77 74.73
13_1_20cm_4_scaffold_120435
Species: Hassallia byssoidea (50%)
2 1499 bp 54.64 3.01 75.85
13_1_20cm_4_scaffold_56579
Species: Pedosphaera parvula (50%)
2 2071 bp 64.75 5.70 86.62
13_1_20cm_4_scaffold_240474
Species: Chamaesiphon minutus (50%)
2 1075 bp 64.47 6.07 77.30
13_1_20cm_4_scaffold_256833
Species: marine sediment metagenome (50%)
2 1029 bp 55.69 6.83 109.62
13_1_20cm_4_scaffold_147393
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1371 bp 68.93 51.44 98.47
13_1_20cm_4_scaffold_104308
Species: R_Betaproteobacteria_64_14 (50%)
2 1595 bp 69.09 4.41 99.87
13_1_20cm_4_scaffold_109378
Species: GWC2_Ignavibacteria_rel_36_12_curated (50%)
2 1563 bp 67.31 4.98 99.23
13_1_20cm_4_scaffold_120667
Species: Coleofasciculus chthonoplastes (50%)
2 1498 bp 60.88 6.87 98.53
13_1_20cm_4_scaffold_58192
Species: Cyanothece sp. PCC 7425 (100%)
2 2045 bp 53.06 5.65 98.29
13_1_20cm_4_scaffold_124353
Species: RBG_16_Actinobacteria_68_12_curated (50%)
2 1479 bp 72.89 4.41 79.92
13_1_20cm_4_scaffold_189327
Species: Synechococcus sp. PCC 7502 (50%)
2 1225 bp 52.65 5.33 91.59
13_1_20cm_4_scaffold_26052
Species: marine sediment metagenome (50%)
2 2873 bp 69.40 11.10 88.13
13_1_20cm_4_scaffold_98744
Species: RLO_WOR_2_51_24 (50%)
2 1633 bp 58.48 5.38 94.98
13_1_20cm_4_scaffold_54506
Species: Hassallia byssoidea (50%)
2 2105 bp 56.25 5.84 98.34
13_1_20cm_4_scaffold_186794
Species: marine sediment metagenome (50%)
2 1233 bp 55.56 2.65 63.75
13_1_20cm_4_scaffold_146242
Species: R_RIF_OD1_12_44_230 (50%)
2 1376 bp 64.10 3.47 88.52
13_1_20cm_4_scaffold_157533
Species: RBG_13_Nitrospirae_39_12_curated (50%)
2 1331 bp 62.73 4.90 100.08
13_1_20cm_4_scaffold_97131
Species: Leptospira kmetyi (50%)
2 1644 bp 66.61 3.82 96.72
13_1_20cm_4_scaffold_226192
Species: Microcystis aeruginosa (100%)
2 1116 bp 53.94 4.27 62.10
13_1_20cm_4_scaffold_173661
Species: Microcoleus sp. PCC 7113 (50%)
2 1275 bp 57.33 4.13 99.76
13_1_20cm_4_scaffold_190019
Species: Candidatus Solibacter usitatus (50%)
2 1224 bp 60.54 8.41 84.80
13_1_20cm_4_scaffold_190480
Species: Geminocystis sp. NIES-3709 (50%)
2 1222 bp 54.09 2.46 86.42
13_1_20cm_4_scaffold_81233
Species: Saccharomonospora cyanea (50%)
2 1775 bp 71.44 5.66 100.06
13_1_20cm_4_scaffold_153134
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated (50%)
2 1348 bp 51.78 2.61 79.67
13_1_20cm_4_scaffold_88378
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1712 bp 65.36 3.52 94.28
13_1_20cm_4_scaffold_222506
Species: Pleurocapsa minor (50%)
2 1127 bp 56.17 2.90 99.56
13_1_20cm_4_scaffold_231492
Species: uncultured bacterium (50%)
2 1101 bp 58.31 2.96 55.59
13_1_20cm_4_scaffold_174814
Species: R_Acidobacteria_67_28 (50%)
2 1271 bp 58.93 3.55 95.83
13_1_20cm_4_scaffold_247851
Species: marine sediment metagenome (50%)
2 1054 bp 69.35 2.14 97.91
13_1_20cm_4_scaffold_69946
Species: Candidatus Jettenia caeni (50%)
2 1893 bp 67.04 5.83 91.13
13_1_20cm_4_scaffold_254301
Species: Geminocystis sp. NIES-3709 (50%)
2 1036 bp 54.83 5.57 81.37
13_1_20cm_4_scaffold_205688
Species: Rivularia sp. PCC 7116 (50%)
2 1177 bp 58.45 2.13 88.19
13_1_20cm_4_scaffold_28094
Species: Chloracidobacterium thermophilum (50%)
2 2786 bp 57.18 3.06 79.79
13_1_20cm_4_scaffold_153597
Species: Gloeobacter kilaueensis (50%)
2 1346 bp 67.16 3.92 98.96
13_1_20cm_4_scaffold_215365
Species: Pyrinomonas methylaliphatogenes (100%)
2 1149 bp 54.57 3.50 85.90
13_1_20cm_4_scaffold_157997
Species: Synechococcus sp. PCC 7002 (50%)
2 2531 bp 56.42 6.25 93.64
13_1_20cm_4_scaffold_161451
Species: RLO_Deltaproteobacteria_60_16 (50%)
2 1316 bp 65.73 7.25 97.11
13_1_20cm_4_scaffold_23011
Species: Gloeobacter violaceus (50%)
2 3024 bp 62.04 5.98 95.63
13_1_20cm_4_scaffold_240017
Species: Aphanizomenon flos-aquae (50%)
2 1076 bp 63.85 4.90 91.45
13_1_20cm_4_scaffold_79854
Species: Spirosoma linguale (50%)
2 1788 bp 51.68 7.58 80.37
Displaying items 501-550 of 3730 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.