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13_1_20CM_4_Cyanobacteria_61_6

13_1_20CM_4_Bacteria_61_6
In projects: 13_1_20CM_4  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 6.14 Longest contig: 9.28 Kbp Bin length: 5.76 Mbp GC content: 60.73 %
Contigs count: 3730 Features count: 6540 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1

Description

All Cyanos. <1 partial genome-CB

Displaying items 601-650 of 3730 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_89768
Species: Pyrinomonas methylaliphatogenes (100%)
2 1701 bp 70.02 6.20 99.82
13_1_20cm_4_scaffold_222283
Species: GWB1_Spirochaetes_60_80_curated (50%)
2 1128 bp 66.67 4.67 94.95
13_1_20cm_4_scaffold_239102
Species: uncultured bacterium (100%)
2 1079 bp 55.05 3.95 94.25
13_1_20cm_4_scaffold_180350
Species: Paenibacillus sp. FSL R5-0345 (50%)
2 1253 bp 68.72 8.01 95.53
13_1_20cm_4_scaffold_122981
Species: Moorea producens (50%)
2 1486 bp 54.91 1.69 102.76
13_1_20cm_4_scaffold_123672
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1482 bp 65.32 5.76 92.51
13_1_20cm_4_scaffold_126206
Species: Hassallia byssoidea (50%)
2 1469 bp 69.91 3.93 97.62
13_1_20cm_4_scaffold_204542
Species: Candidatus Entotheonella sp. TSY2 (50%)
2 1180 bp 65.34 3.40 75.25
13_1_20cm_4_scaffold_158925
Species: Cylindrospermum stagnale (50%)
2 1326 bp 58.14 2.46 87.56
13_1_20cm_4_scaffold_109619
Species: R_Acidobacteria_65_29 (50%)
2 1562 bp 69.72 4.66 96.22
13_1_20cm_4_scaffold_228967
Species: Candidatus Methanoperedens nitroreducens (50%)
2 1108 bp 69.13 4.76 100.18
13_1_20cm_4_scaffold_174822
Species: Gloeobacter kilaueensis (50%)
2 1271 bp 55.31 6.71 100.08
13_1_20cm_4_scaffold_176435
Species: Tolypothrix campylonemoides (100%)
2 1266 bp 62.88 3.37 89.57
13_1_20cm_4_scaffold_238412
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1081 bp 70.68 4.18 97.96
13_1_20cm_4_scaffold_194176
Species: Methylobacterium aquaticum (50%)
2 1211 bp 63.25 3.94 72.09
13_1_20cm_4_scaffold_204082
Species: Microcoleus vaginatus (50%)
2 1182 bp 55.92 3.40 90.36
13_1_20cm_4_scaffold_82164
Species: Synechococcus sp. RCC307 (50%)
2 1766 bp 65.29 2.98 100.06
13_1_20cm_4_scaffold_149249
Species: uncultured bacterium (100%)
2 1364 bp 56.67 2.58 99.63
13_1_20cm_4_scaffold_86543
Species: [Oscillatoria] sp. PCC 6506 (50%)
2 1727 bp 58.43 6.83 90.68
13_1_20cm_4_scaffold_154087
Species: RBG_16_Chloroflexi_57_11_curated (50%)
2 2018 bp 64.12 10.45 87.56
13_1_20cm_4_scaffold_92302
Species: Pyrinomonas methylaliphatogenes (50%)
2 1680 bp 67.74 6.87 86.79
13_1_20cm_4_scaffold_223206
Species: Scytonema millei (50%)
2 1125 bp 53.24 6.25 64.00
13_1_20cm_4_scaffold_55439
Species: Acaryochloris marina (50%)
2 2090 bp 69.71 10.93 84.26
13_1_20cm_4_scaffold_81474
Species: [Oscillatoria] sp. PCC 6506 (50%)
2 1772 bp 55.64 12.61 84.31
13_1_20cm_4_scaffold_210304
Species: Arthrospira platensis (50%)
2 1163 bp 47.72 2.81 101.38
13_1_20cm_4_scaffold_161460
Species: Massilia consociata (50%)
2 1316 bp 69.76 3.43 100.30
13_1_20cm_4_scaffold_222055
Species: Tolypothrix campylonemoides (50%)
2 1128 bp 51.33 4.67 72.61
13_1_20cm_4_scaffold_167682
Species: Lyngbya aestuarii (50%)
2 1295 bp 52.51 8.72 51.43
13_1_20cm_4_scaffold_111232
Species: Tolypothrix campylonemoides (50%)
2 1551 bp 50.87 6.80 82.40
13_1_20cm_4_scaffold_112615
Species: Anabaena variabilis (50%)
2 1543 bp 63.25 6.67 89.63
13_1_20cm_4_scaffold_171829
Species: R_Dadabacteria_53_21 (50%)
2 1281 bp 58.00 3.72 100.00
13_1_20cm_4_scaffold_114459
Species: Candidatus Methylomirabilis oxyfera (50%)
2 1533 bp 69.08 5.24 92.37
13_1_20cm_4_scaffold_57283
Species: Gloeobacter violaceus (50%)
2 2060 bp 59.27 4.26 99.32
13_1_20cm_4_scaffold_243922
Species: Desulfovibrio sp. TomC (50%)
2 1065 bp 66.76 4.48 95.21
13_1_20cm_4_scaffold_185422
Species: Streptomyces sp. AcH 505 (50%)
2 1237 bp 66.05 8.12 100.16
13_1_20cm_4_scaffold_193948
Species: mine drainage metagenome (50%)
2 1212 bp 59.24 5.59 99.01
13_1_20cm_4_scaffold_74794
Species: Microcoleus vaginatus (50%)
2 1838 bp 71.87 6.28 100.54
13_1_20cm_4_scaffold_84471
Species: marine sediment metagenome (50%)
2 1745 bp 55.19 6.76 100.06
13_1_20cm_4_scaffold_216297
Species: RBG_16_RIF03_38_11_curated (50%)
2 1146 bp 73.30 4.60 97.38
13_1_20cm_4_scaffold_93226
Species: Nostoc punctiforme (50%)
2 1673 bp 60.67 5.70 93.25
13_1_20cm_4_scaffold_167221
Species: Chamaesiphon minutus (50%)
2 1296 bp 45.91 2.13 92.82
13_1_20cm_4_scaffold_171369
Species: Moorea producens (50%)
2 1283 bp 50.19 8.02 98.44
13_1_20cm_4_scaffold_255234
Species: Moorea producens (50%)
2 1033 bp 73.18 9.96 99.90
13_1_20cm_4_scaffold_264681
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated (50%)
2 1009 bp 60.26 6.47 88.60
13_1_20cm_4_scaffold_87006
Species: Prochlorococcus marinus (50%)
2 1723 bp 67.73 6.85 88.97
13_1_20cm_4_scaffold_108218
Species: Calothrix sp. PCC 7507 (50%)
2 1570 bp 57.26 15.67 90.76
13_1_20cm_4_scaffold_187268
Species: uncultured bacterium (50%)
2 1232 bp 50.81 4.28 82.55
13_1_20cm_4_scaffold_187499
Species: Chroococcidiopsis thermalis (50%)
2 1231 bp 58.16 5.51 69.46
13_1_20cm_4_scaffold_66500
Species: Gloeobacter violaceus (50%)
2 1934 bp 68.98 5.19 96.95
13_1_20cm_4_scaffold_258230
Species: Gloeobacter violaceus (50%)
2 1025 bp 73.95 6.37 87.80
Displaying items 601-650 of 3730 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.