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13_1_40cm_4_scaffold_1319

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1319_1
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

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comp(2..2803)
DNA (2802bp) protein (934aa)
Uncharacterized protein n=1 Tax=Polysphondylium pallidum RepID=D3B248_POLPA
Uncharacterized protein {ECO:0000313|EMBL:EFA84423.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;
collagen triple helix repeat-containing cell surface protein
13_1_40cm_4_scaffold_1319_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2905..5880)
DNA (2976bp) protein (992aa)
Surface antigen (D15) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV47_KORVE
surface antigen Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
surface antigen (D15)
13_1_40cm_4_scaffold_1319_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(6029..8455)
DNA (2427bp) protein (809aa)
ATPase AAA-2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKM6_KORVE
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ATPase AAA
13_1_40cm_4_scaffold_1319_4
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8457..9233)
DNA (777bp) protein (259aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales;
ABC transporter related protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8B8_TERSS
ABC transporter-like protein
13_1_40cm_4_scaffold_1319_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(9568..10794)
DNA (1227bp) protein (409aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN2_KORVE
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
LolC/E family lipoprotein releasing system, transmembrane protein
13_1_40cm_4_scaffold_1319_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10813..12366)
DNA (1554bp) protein (518aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS62_KORVE
lysyl-tRNA synthetase
13_1_40cm_4_scaffold_1319_7
unknown

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12610..13335
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_40cm_4_scaffold_1319_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13547..14158
DNA (612bp) protein (204aa)
RNA polymerase subunit sigma-24 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000367095E
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:ACO33209.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (stra
13_1_40cm_4_scaffold_1319_9
unknown

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comp(14195..14644)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_1319_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14942..15859
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI0003497C1B
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_1319_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

15945..16475
DNA (531bp) protein (177aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
shikimate kinase (EC:2.7.1.71)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E787
13_1_40cm_4_scaffold_1319_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

16482..17267
DNA (786bp) protein (262aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_4_scaffold_1319_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17356..18060)
DNA (705bp) protein (235aa)
Transcriptional regulator, XRE family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT4_KORVE
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABF40416.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_1_40cm_4_scaffold_1319_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18531..18827)
DNA (297bp) protein (99aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021D0_SOLUE
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABJ84459.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
13_1_40cm_4_scaffold_1319_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18949..19359
DNA (411bp) protein (137aa)
Metal dependent phosphohydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK6_9BACT
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
metal dependent phosphohydrolase
Displaying 15 items

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