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13_1_40cm_4_scaffold_2740

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2740_1

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3..563
DNA (561bp) protein (187aa)
hypothetical protein id=8267367 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Serine/threonine protein kinase {ECO:0000313|EMBL:EQB63028.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
conserved protein of unknown function, TPR repeat domain
13_1_40cm_4_scaffold_2740_2
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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640..924
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376EF43
transcriptional regulator domain-containing protein Tax=RBG_13_Aminicenantes_59_9_curated
transcriptional regulator domain-containing protein
13_1_40cm_4_scaffold_2740_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(980..1894)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM1_KORVE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF40479.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_4_scaffold_2740_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(1975..6360)
DNA (4386bp) protein (1462aa)
Glutamate synthase [nadph] large chain {ECO:0000313|EMBL:ACM05049.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ACM05049.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Th
glutamate synthase [nadph] large chain (EC:1.4.1.13)
Glutamate synthase [nadph] large chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0N4_THERP
13_1_40cm_4_scaffold_2740_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(6456..7847)
DNA (1392bp) protein (464aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK34_KORVE
peptidase U62, modulator of DNA gyrase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_4_scaffold_2740_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(7844..8530)
DNA (687bp) protein (229aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK33_KORVE
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_4_scaffold_2740_7
unknown

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8547..9140
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_4_scaffold_2740_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9388..10530)
DNA (1143bp) protein (381aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1E9_ACIC5
13_1_40cm_4_scaffold_2740_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10676..11866)
DNA (1191bp) protein (397aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA3_CHLTF
13_1_40cm_4_scaffold_2740_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(12059..12820)
DNA (762bp) protein (254aa)
Peptide chain release factor 2 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F428_ACIC5
prfB; peptide chain release factor 2, programmed frameshift
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobact
13_1_40cm_4_scaffold_2740_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13253..14845)
DNA (1593bp) protein (531aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Apolipoprotein N-acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP58_KORVE
apolipoprotein N-acyltransferase
13_1_40cm_4_scaffold_2740_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14845..15483)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035FE692
sporulation/cell division repeat protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_4_scaffold_2740_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15525..16295)
DNA (771bp) protein (257aa)
SPFH domain, Band 7 family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R1_SOLUE
SPFH domain-containing protein/band 7 family protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_2740_14
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(16321..17721)
DNA (1401bp) protein (467aa)
Nodulation efficiency protein NfeD n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R2_SOLUE
nodulation efficiency protein NfeD; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
nodulation efficiency protein NfeD
13_1_40cm_4_scaffold_2740_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17718..19223)
DNA (1506bp) protein (502aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INM1_KORVE
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_2740_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19516..20367)
DNA (852bp) protein (284aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026S6_SOLUE
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ82993.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soliba
13_1_40cm_4_scaffold_2740_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20364..20960)
DNA (597bp) protein (199aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABF40068.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABF40068.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
Penicillin-binding protein 1A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST2_KORVE
penicillin-binding protein 1A
Displaying 17 items

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