ggKbase home page

13_1_40cm_4_scaffold_38274

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_38274_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..284)
DNA (282bp) protein (94aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lipA: lipoyl synthase
Lipoate synthase id=4899352 bin=GWC2_Chloroflexi_73_18 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_38274_2
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(1196..1588)
DNA (393bp) protein (131aa)
RNP-1 like RNA-binding protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2B4_COMTE
RNP-1 like RNA-binding protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
rnp-1 like RNA-binding protein
13_1_40cm_4_scaffold_38274_3
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1866..3518
DNA (1653bp) protein (551aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEB10803.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEB10803.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marini
O-succinylbenzoate--CoA ligase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKP0_MARHT
13_1_40cm_4_scaffold_38274_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3552..4868)
DNA (1317bp) protein (439aa)
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35 2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPHIGHO2_01_FULL_Acidob
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein argJ n=1 Tax=mine drainage metagenome RepID=E6PZJ6_9ZZZZ
13_1_40cm_4_scaffold_38274_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4869..5690)
DNA (822bp) protein (274aa)
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_0000
Argininosuccinate lyase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=ARLY_ROSS1
argininosuccinate lyase
13_1_40cm_4_scaffold_38274_6
unknown

Not on your lists

5863..6447
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_4_scaffold_38274_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6357..6764)
DNA (408bp) protein (136aa)
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7T6_TERSS
13_1_40cm_4_scaffold_38274_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6827..7510)
DNA (684bp) protein (228aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003786637
Argininosuccinate synthase
13_1_40cm_4_scaffold_38274_9
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7610..8194)
DNA (585bp) protein (195aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=240015 species="Bacte
ornithine carbamoyltransferase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035CB501
Displaying 9 items

View Taxonomy