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13_1_40cm_4_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_450_1
unknown

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(424..1023)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RECR_KORVE
recR; recombination protein RecR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_4_scaffold_450_3
unknown

Not on your lists

comp(1157..1375)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_4
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(1400..2449)
DNA (1050bp) protein (350aa)
ATP-dependent RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
DEAD/DEAH box helicase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMK6_KORVE
DEAD/DEAH box helicase
13_1_40cm_4_scaffold_450_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2773..3099)
DNA (327bp) protein (109aa)
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein; K09747 hypothetical protein id=12556304 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_4_scaffold_450_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3099..4895)
DNA (1797bp) protein (599aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA polymerase III, tau subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ74_KORVE
DNA polymerase III subunits gamma and tau
13_1_40cm_4_scaffold_450_7
unknown

Not on your lists

5024..5251
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_8

Not on your lists

comp(5260..5781)
DNA (522bp) protein (174aa)
Anti-ECF sigma factor ChrR n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FNT9_9RHIZ
Cupin domain protein {ECO:0000313|EMBL:AIA10621.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_450_9
unknown

Not on your lists

comp(5861..6247)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6328..6942)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Y6_NIAKG
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_450_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7396..8172)
DNA (777bp) protein (259aa)
Transcriptional regulatory protein zraR n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WQU8_DESPC
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
zraR; Transcriptional regulatory protein zraR
13_1_40cm_4_scaffold_450_12
unknown

Not on your lists

comp(8892..9110)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_13
unknown

Not on your lists

comp(9175..9474)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9629..10336)
DNA (708bp) protein (236aa)
peptidase, M50 family (EC:3.4.24.-)
peptidase M50 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Zn-dependent protease id=2964357 bin=GWC2_Nitrospirae_57_13 species=Methylophaga lonarensis genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_40cm_4_scaffold_450_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10547..13111)
DNA (2565bp) protein (855aa)
permease n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E357A
Uncharacterized protein {ECO:0000313|EMBL:ABJ82870.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_40cm_4_scaffold_450_16
unknown

Not on your lists

13457..13741
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_17
unknown

Not on your lists

13828..14073
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_18
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

14315..15007
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XKD2_LEEBM
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
hypothetical protein
13_1_40cm_4_scaffold_450_19
unknown

Not on your lists

15118..15288
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_450_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15204..16793)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C7E84
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:ABJ85063.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usit
13_1_40cm_4_scaffold_450_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17009..17593)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P142_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34459.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
13_1_40cm_4_scaffold_450_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17736..18185
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP31_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41369.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_450_23
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18426..19025)
DNA (600bp) protein (200aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1144304 s
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Caulobacter sp. AP07 RepID=J2HGE4_9CAUL
13_1_40cm_4_scaffold_450_24
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(19081..19401)
DNA (321bp) protein (107aa)
Acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVT7_9CHLR
hypothetical protein; K06975 Tax=CG_Anaero_04
hypothetical protein
13_1_40cm_4_scaffold_450_25
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(19457..19903)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IVL5_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC81400.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
13_1_40cm_4_scaffold_450_26

Not on your lists

comp(20028..20957)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QIP6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07112.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_450_27

Not on your lists

21290..22477
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361CBC2
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48806.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD(P)(+) transhydrogenase
13_1_40cm_4_scaffold_450_28

Not on your lists

22474..22782
DNA (309bp) protein (103aa)
Nicotinamide nucleotide transhydrogenase, subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIW4_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48807.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nicotinamide nucleotide transhydrogenase subunit alpha
13_1_40cm_4_scaffold_450_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22779..24173
DNA (1395bp) protein (465aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIW5_KORVE
NAD(P) transhydrogenase subunit beta
13_1_40cm_4_scaffold_450_30
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24256..26886)
DNA (2631bp) protein (877aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIL6_KORVE
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43284.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
Displaying items 1-30 of 34 in total

View Taxonomy