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13_1_40cm_4_scaffold_20044

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_20044_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(1..591)
DNA (591bp) protein (197aa)
Putative FtsW/RodA/SpoVE family cell cycle protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZV00_9ACTN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative FtsW/RodA/SpoVE family cell cycle protein
13_1_40cm_4_scaffold_20044_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(588..1028)
DNA (441bp) protein (147aa)
forkhead-associated protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
FHA domain-containing protein id=14628689 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
FHA domain-containing protein
13_1_40cm_4_scaffold_20044_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(1029..1784)
DNA (756bp) protein (252aa)
Forkhead-associated protein n=1 Tax=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) RepID=A9WEE2_CHLAA
forkhead-associated protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
forkhead-associated protein
13_1_40cm_4_scaffold_20044_4
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(1771..2433)
DNA (663bp) protein (221aa)
tRNA-processing RNAse BN n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EY18_9BACT
tRNA-processing RNAse BN
tRNA-processing RNAse BN {ECO:0000313|EMBL:CCW36414.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas ca
13_1_40cm_4_scaffold_20044_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(2583..2909)
DNA (327bp) protein (109aa)
FmdB family regulatory protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Regulatory protein, FmdB family id=4359334 bin=GWF2_Planctomycete_41_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
13_1_40cm_4_scaffold_20044_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2946..3935
DNA (990bp) protein (330aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U8B3_OCEP5
carbohydrate ABC transporter membrane protein 1, cut1 family; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
carbohydrate ABC transporter membrane protein 1, cut1 family
13_1_40cm_4_scaffold_20044_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3928..4812
DNA (885bp) protein (295aa)
carbohydrate ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
carbohydrate uptake ABC transporter permease; K02026 multiple sugar transport system permease protein id=14632830 bin=bin9_gal15 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
carbohydrate ABC transporter membrane protein 2
13_1_40cm_4_scaffold_20044_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4910..6241
DNA (1332bp) protein (444aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Extracellular solute-binding protein family 1 id=2123549 bin=GWB2_Chloroflexi_54_36 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_20044_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(6304..8823)
DNA (2520bp) protein (840aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Valine--tRNA ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C479_SPHTD
valyl-tRNA synthetase
13_1_40cm_4_scaffold_20044_10
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(9261..9596)
DNA (336bp) protein (112aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3K3_THERP
cupin 2, conserved barrel domain protein
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ACM06449.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium r
13_1_40cm_4_scaffold_20044_11
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(9618..10892)
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=14628678 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=CSP1_4_Chloroflexi
13_1_40cm_4_scaffold_20044_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(10889..11551)
DNA (663bp) protein (221aa)
ATP-dependent Clp protease, proteolytic subunit ClpP id=14628677 bin=bin8_Chloro species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent Clp protease, proteolytic subunit ClpP Tax=CSP1_4_Chloroflexi
ATP-dependent Clp protease, proteolytic subunit ClpP
13_1_40cm_4_scaffold_20044_13
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

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comp(11579..11914)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000347D048
Multi-component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFZ36484.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera
multi-component transcriptional regulator, winged helix family
13_1_40cm_4_scaffold_20044_14
unknown

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11962..12636
DNA (675bp) protein (225aa)

This feature has no annotations

Displaying 14 items

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