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13_1_40cm_4_scaffold_28710

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_28710_1
unknown

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comp(1..591)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_4_scaffold_28710_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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600..1154
DNA (555bp) protein (185aa)
GTPase obg; K03979 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTPase obg id=4832812 bin=GWC2_Chloroflexi_73_18 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GTP-binding protein Obg/CgtA
13_1_40cm_4_scaffold_28710_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1204..1758
DNA (555bp) protein (185aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=NADD_ROSS1
13_1_40cm_4_scaffold_28710_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1755..2108
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=2 Tax=Paenibacillus RepID=F5LN80_9BACL
hypothetical protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
iojap family protein
13_1_40cm_4_scaffold_28710_trna_1
unknown

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2200..2272
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_28710_5
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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2459..2995
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3G5_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD42006.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
13_1_40cm_4_scaffold_28710_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2996..3652
DNA (657bp) protein (219aa)
Regulatory protein ArsR n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IU11_FRASU
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADP81204.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_40cm_4_scaffold_28710_7
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3633..4088)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JCI4_BURP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC70985.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phyma
13_1_40cm_4_scaffold_28710_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4269..5111)
DNA (843bp) protein (281aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W796_9GAMM
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL95337.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
AraC family transcriptional regulator
13_1_40cm_4_scaffold_28710_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5157..5933
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037F3A3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ26843.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
13_1_40cm_4_scaffold_28710_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6103..6225
DNA (123bp) protein (41aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_28710_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6604..7632)
DNA (1029bp) protein (343aa)
CarR gene n=1 Tax=Azospirillum brasilense RepID=Q43901_AZOBR
hypothetical protein
Uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_28710_12
unknown

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7889..8164
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_28710_13
unknown

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8441..8764
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_4_scaffold_28710_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8911..9483)
DNA (573bp) protein (191aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT id=1247317 bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
winged helix family two component transcriptional regulator Tax=RBG_16_RIF_CHLX_69_14_curated
winged helix family two component transcriptional regulator
Displaying 15 items

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