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13_1_40cm_4_scaffold_8850

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8850_1
unknown

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comp(137..505)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_4_scaffold_8850_2
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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927..1328
DNA (402bp) protein (134aa)
copper-binding protein, plastocyanin/azurin family Tax=RBG_16_RIF_CHLX_70_13_curated
copI; putative oxido-reductase protein CopI
13_1_40cm_4_scaffold_8850_3
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

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1390..2229
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DCA2_9BACL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
membrane protease subunit, stomatin/prohibitin
13_1_40cm_4_scaffold_8850_4
unknown

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2235..2396
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_8850_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(2514..4436)
DNA (1923bp) protein (641aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
chaperone protein DnaK (EC:1.3.1.74)
Chaperone protein DnaK n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCZ1_THET1
13_1_40cm_4_scaffold_8850_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4429..4677)
DNA (249bp) protein (83aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Protein GrpE id=4531816 bin=GWC2_Chloroflexi_73_18 species=uncultured bacterium 148 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
GrpE protein HSP-70 cofactor
13_1_40cm_4_scaffold_8850_7
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(4988..5590)
DNA (603bp) protein (201aa)
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RBG_13_Chloroflexi_68_17_curated
atm:ANT_25070 hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=1245009 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
heat-inducible transcription repressor HrcA
13_1_40cm_4_scaffold_8850_8
unknown

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5800..6021
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_8850_9
Listeria booriae, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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6173..6589
DNA (417bp) protein (139aa)
Large-conductance mechanosensitive channel n=2 Tax=Geobacter sulfurreducens RepID=MSCL_GEOSL
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=1552123 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria booriae.;"
mscL; large-conductance mechanosensitive channel
13_1_40cm_4_scaffold_8850_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6590..6982)
DNA (393bp) protein (131aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0A7_COMTE
transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
chemotaxis protein CheY
13_1_40cm_4_scaffold_8850_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6983..7681)
DNA (699bp) protein (233aa)
Putative Crp family transcriptional regulator n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WTV0_9MICO
Crp/Fnr family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Crp/Fnr family transcriptional regulator
13_1_40cm_4_scaffold_8850_12
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7758..8678
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VIX3_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX77898.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
XRE family transcriptional regulator
13_1_40cm_4_scaffold_8850_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8675..8782
DNA (108bp) protein (36aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_8850_14
unknown

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9331..9588
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_8850_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9585..9968)
DNA (384bp) protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7V8_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB52852.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
13_1_40cm_4_scaffold_8850_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9971..11002)
DNA (1032bp) protein (344aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7G5_SPHTD
13_1_40cm_4_scaffold_8850_17
unknown

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11245..11667
DNA (423bp) protein (141aa)

This feature has no annotations

Displaying 17 items

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