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13_1_40cm_4_scaffold_23818

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_23818_1
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1301)
-----------------
DNA (1299bp)
protein (433aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31) Tax=GWF1_Xanthomonadales_69_6_curated
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase id=2990033 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
13_1_40cm_4_scaffold_23818_2
unknown

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comp(1484..1732)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_23818_3
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(1732..2973)
-----------------
DNA (1242bp)
protein (414aa)
glycosyl hydrolases 38-like Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein id=16786537 bin=RBG_16_Aminicenantes_63_16_plus species=Alistipes sp. CAG:268 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
13_1_40cm_4_scaffold_23818_4
unknown

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4422..4664
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_23818_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4712..5368)
-----------------
DNA (657bp)
protein (219aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R600_ISOPI
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_23818_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5649..6716)
-----------------
DNA (1068bp)
protein (356aa)
folate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B6716F
putative aminomethyl transferase; K06980 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative aminomethyl transferase
13_1_40cm_4_scaffold_23818_7
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6713..7336)
-----------------
DNA (624bp)
protein (208aa)
putative beta-phosphoglucomutase (EC:5.4.2.6) Tax=RBG_13_Deltaproteobacteria_65_10_curated
Putative Beta-phosphoglucomutase id=1969952 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphatase/phosphohexomutase-like hydrolase
13_1_40cm_4_scaffold_23818_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7333..8190)
-----------------
DNA (858bp)
protein (286aa)
Oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22) Tax=GWC2_Gemmatimonadetes_71_10_curated
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X502_PSEDE
Oxygen-independent coproporphyrinogen III oxidase
13_1_40cm_4_scaffold_23818_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8187..9401)
-----------------
DNA (1215bp)
protein (405aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT
protein of unknown function DUF224 cysteine-rich region domain protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_23818_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9398..10606)
-----------------
DNA (1209bp)
protein (403aa)
Glycolate oxidase subunit n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NCA8_GLOVI
glcE; glycolate oxidase subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
FAD linked oxidase domain-containing protein
13_1_40cm_4_scaffold_23818_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10603..12027)
-----------------
DNA (1425bp)
protein (475aa)
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT
FAD linked oxidase domain protein
13_1_40cm_4_scaffold_23818_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12133..12393)
-----------------
DNA (261bp)
protein (87aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
Displaying 12 items

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