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13_1_40cm_4_scaffold_6060

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6060_1
unknown

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comp(3..98)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

13_1_40cm_4_scaffold_6060_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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121..387
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABN2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_6060_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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432..1340
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
iron-sulfur cluster binding protein, putative
13_1_40cm_4_scaffold_6060_4
unknown

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1337..1621
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_6060_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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1639..4044
-----------------
DNA (2406bp)
protein (802aa)
Glutamyl peptidase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEP6_9BACT
Glutamyl peptidase {ECO:0000313|EMBL:BAL54632.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glutamyl peptidase
13_1_40cm_4_scaffold_6060_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4169..5644)
-----------------
DNA (1476bp)
protein (492aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M20
13_1_40cm_4_scaffold_6060_7
unknown

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comp(5704..6228)
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

13_1_40cm_4_scaffold_6060_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(6213..6986)
-----------------
DNA (774bp)
protein (258aa)
Predicted ATPase {ECO:0000313|EMBL:CCW33988.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirose
Predicted ATPase
13_1_40cm_4_scaffold_6060_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6983..8380)
-----------------
DNA (1398bp)
protein (466aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIN1_ANADF
two component sigma54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS28577.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcal
13_1_40cm_4_scaffold_6060_10
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(8389..8829)
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003683974
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
stage II sporulation protein M
13_1_40cm_4_scaffold_6060_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8962..9378)
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003707C03
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:KCZ71458.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae;
rsbT; sigma activity regulating kinase
13_1_40cm_4_scaffold_6060_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9371..9751)
-----------------
DNA (381bp)
protein (127aa)
Antagonist protein RsbS id=4927122 bin=GWA2_Ignavibacteria_55_11 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
rsbS; sigma activity regulator
Displaying 12 items

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