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13_1_40cm_4_scaffold_1172

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1172_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

13_1_40cm_4_scaffold_1172_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

114..1712
DNA (1599bp) protein (533aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_4_scaffold_1172_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1813..3063
DNA (1251bp) protein (417aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1172_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3038..3355
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Extracellular solute-binding protein family 5 id=4793584 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1172_5
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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3542..4582
DNA (1041bp) protein (347aa)
putative heavy metal efflux system, membrane fusion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=12557539 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND transporter
13_1_40cm_4_scaffold_1172_6
unknown

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4852..5067
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_1172_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5175..5456)
DNA (282bp) protein (94aa)
Redoxin domain protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Redoxin domain protein id=4646441 bin=GWA2_Methylomirabilis_73_35 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiol-disulfide oxidoreductase
13_1_40cm_4_scaffold_1172_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5493..5708)
DNA (216bp) protein (72aa)
putative thiol-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Thioredoxin family protein id=4646438 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiol-disulfide oxidoreductase
13_1_40cm_4_scaffold_1172_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5705..5980)
DNA (276bp) protein (92aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4646434 bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=GWA2_Rokubacteria_73_35_curated
alkyl hydroperoxide reductase
13_1_40cm_4_scaffold_1172_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(6044..6256)
DNA (213bp) protein (71aa)
alkyl hydroperoxide reductase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=RBG_16_NC10_65_8_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4646430 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1172_11
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(6509..6976)
DNA (468bp) protein (156aa)
CBS domain containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW6_THET1
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ACZ42987.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_4_scaffold_1172_12

Not on your lists

comp(6980..7183)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW5_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN10446.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_1172_13
unknown

Not on your lists

comp(7414..7524)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_4_scaffold_1172_14

Not on your lists

comp(7521..7919)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK81065.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=2669483 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1172_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7930..8214)
DNA (285bp) protein (95aa)
id=2669476 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=2669476 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1172_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8602..9123)
DNA (522bp) protein (174aa)
alkylmercury lyase Tax=GWA2_Rokubacteria_73_35_curated
Alkylmercury lyase family protein id=4255768 bin=GWC2_Methylomirabilis_70_16 species=Rhodococcus opacus genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alkylmercury lyase family protein
13_1_40cm_4_scaffold_1172_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

9206..9673
DNA (468bp) protein (156aa)
Mercuric resistance operon regulatory protein id=3329365 bin=GWA2_Elusimicrobia_69_24 species=Brevundimonas diminuta genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein Tax=GWA2_Elusimicrobia_69_24_curated
MerR family transcriptional regulator
13_1_40cm_4_scaffold_1172_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9964..10251)
DNA (288bp) protein (96aa)
id=14430094 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
13_1_40cm_4_scaffold_1172_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10282..11517)
DNA (1236bp) protein (412aa)
hypothetical protein id=14430095 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_4_scaffold_1172_20
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11530..11790)
DNA (261bp) protein (87aa)
hypothetical protein id=14430096 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
Displaying 20 items

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