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13_1_40cm_4_scaffold_12439

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12439_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW94109.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
13_1_40cm_4_scaffold_12439_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

981..1580
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QBD0_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE25967.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
13_1_40cm_4_scaffold_12439_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1766..2353)
DNA (588bp) protein (196aa)
Phosphoesterase, PA-phosphatase related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZG8_RUBXD
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ABG03210.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;
13_1_40cm_4_scaffold_12439_4
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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2618..2992
DNA (375bp) protein (125aa)
putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Putative transcriptional regulator id=4666158 bin=GWC2_Methylomirabilis_70_24 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GntR family transcriptional regulator
13_1_40cm_4_scaffold_12439_5
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2958..4706)
DNA (1749bp) protein (583aa)
ABC transporter domain-containing protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7U4A5_9DELT
ABC transporter domain-containing protein {ECO:0000313|EMBL:EPR44281.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;"
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_12439_6
unknown

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5082..5894
DNA (813bp) protein (271aa)

This feature has no annotations

13_1_40cm_4_scaffold_12439_7
unknown

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5903..6553
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_40cm_4_scaffold_12439_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6575..7699)
DNA (1125bp) protein (375aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGJ4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF61045.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
ABC transporter-like protein
13_1_40cm_4_scaffold_12439_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7774..8436)
DNA (663bp) protein (221aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGJ4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF61045.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
ABC transporter family carbohydrate exporter
13_1_40cm_4_scaffold_12439_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9196..9519)
DNA (324bp) protein (108aa)
Putative uncharacterized protein id=4827669 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_12439_11
unknown

Not on your lists

9852..10547
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_40cm_4_scaffold_12439_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10968..11258
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4915455 bin=GWC2_Methylomirabilis_70_24 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_12439_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11255..11608
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3970983 bin=GWC2_Methylomirabilis_70_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_12439_14
unknown

Not on your lists

11724..12836
DNA (1113bp) protein (371aa)

This feature has no annotations

13_1_40cm_4_scaffold_12439_15
unknown

Not on your lists

12837..13610
DNA (774bp) protein (258aa)

This feature has no annotations

13_1_40cm_4_scaffold_12439_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14055..14843
DNA (789bp) protein (263aa)
formyl-coenzyme A transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI0003712462
formyl-coenzyme A transferase
13_1_40cm_4_scaffold_12439_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14894..15922)
DNA (1029bp) protein (343aa)
Bacterial capsule synthesis protein PGA_cap family protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HME5_ACHXA
capsule synthesis protein PGA_cap family protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
bacterial capsule synthesis PGA_cap family protein
13_1_40cm_4_scaffold_12439_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15950..16897)
DNA (948bp) protein (316aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase id=2556871 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
zinc-binding oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
alcohol dehydrogenase
13_1_40cm_4_scaffold_12439_19
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17041..17451
DNA (411bp) protein (137aa)
virulence protein n=1 Tax=Rhizobium loti RepID=UPI000363BA78
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:ETA72139.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
Glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_12439_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17520..18053
DNA (534bp) protein (178aa)
PauA n=2 Tax=Pseudomonas putida RepID=E4RCD4_PSEPB
CoA-binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
pauA; PauA
Displaying 20 items

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