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13_1_40cm_4_scaffold_1694

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1694_1
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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1..3894
-----------------
DNA (3894bp)
protein (1298aa)
glutamate synthase [nadph] large chain (EC:1.4.1.13)
Glutamate synthase [nadph] large chain {ECO:0000313|EMBL:ACM05049.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ACM05049.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Th
Glutamate synthase [nadph] large chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0N4_THERP
13_1_40cm_4_scaffold_1694_2
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4279..4755)
-----------------
DNA (477bp)
protein (159aa)
HxlR family transcriptional regulator n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RHK4_MYCXE
HxlR family transcriptional regulator {ECO:0000313|EMBL:EID10607.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi
HxlR family transcriptional regulator
13_1_40cm_4_scaffold_1694_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4847..6247
-----------------
DNA (1401bp)
protein (467aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E685_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10783.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
major facilitator MFS1 protein
13_1_40cm_4_scaffold_1694_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6252..6752
-----------------
DNA (501bp)
protein (167aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQU7_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04677.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_4_scaffold_1694_5
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6749..7240
-----------------
DNA (492bp)
protein (164aa)
CoA-binding domain protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABG8_THECD
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:ACY97204.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (
13_1_40cm_4_scaffold_1694_6
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

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comp(7230..8048)
-----------------
DNA (819bp)
protein (273aa)
oxidoreductase domain-containing protein Tax=RBG_13_Aminicenantes_64_14_curated
oxidoreductase domain-containing protein id=17275890 bin=RBG_16_Aminicenantes_63_14 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_1694_7
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8266..9903)
-----------------
DNA (1638bp)
protein (546aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4ILV3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ11057.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_1694_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(9923..11002)
-----------------
DNA (1080bp)
protein (360aa)
Glycosyl transferase group 1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C274_SPHTD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACZ38341.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_1_40cm_4_scaffold_1694_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(11311..12963)
-----------------
DNA (1653bp)
protein (551aa)
TPR repeat-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Chloroflexi_63_12_curated
Serine/threonine protein kinase n=2 Tax=Micrococcus luteus RepID=C5CA45_MICLC
serine/threonine protein kinase
13_1_40cm_4_scaffold_1694_10
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12974..13375)
-----------------
DNA (402bp)
protein (134aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
PAS domain S-box n=1 Tax=Desulfovibrio sp. U5L RepID=I2PYX9_9DELT
PAS domain S-box {ECO:0000313|EMBL:EIG52735.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp.
13_1_40cm_4_scaffold_1694_11
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

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comp(13368..14639)
-----------------
DNA (1272bp)
protein (424aa)
putative Histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI0003732A38
hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
13_1_40cm_4_scaffold_1694_12
unknown

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14959..15600
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

13_1_40cm_4_scaffold_1694_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(15888..17033)
-----------------
DNA (1146bp)
protein (382aa)
Response regulator receiver modulated serine phosphatase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN8_RUBXD
response regulator receiver modulated serine phosphatase
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:ABG05590.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacterace
13_1_40cm_4_scaffold_1694_14
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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17107..17448
-----------------
DNA (342bp)
protein (114aa)
Anti-sigma factor antagonist n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BKQ2_MYCCN
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (str
13_1_40cm_4_scaffold_1694_15
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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17498..17872
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RTJ3_MYCRN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI11456.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 /
13_1_40cm_4_scaffold_1694_16
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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17848..18111
-----------------
DNA (264bp)
protein (88aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AEV84273.1}; EC=2.7.3.- {ECO:0000313|EMBL:AEV84273.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae;
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
13_1_40cm_4_scaffold_1694_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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18108..19121
-----------------
DNA (1014bp)
protein (338aa)
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=3 Tax=Caldanaerobacter subterraneus RepID=Q8R9A0_THETN
OmpR5; response regulator
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain {ECO:0000313|EMBL:AAM24917.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales
13_1_40cm_4_scaffold_1694_18
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19510..21273
-----------------
DNA (1764bp)
protein (588aa)
Type II secretion system protein E n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL90_THEM7
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ADU51321.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" s
Displaying 18 items

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