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13_1_40cm_4_scaffold_3460

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3460_1
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

110..1477
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00031ECD7C
helix-turn-helix domain-containing protein
Tax=BJP_08E140C01_Bacteriodales_41_10
13_1_40cm_4_scaffold_3460_2
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1491..2117)
DNA (627bp) protein (209aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P1R3_STRVO
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEM88241.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strepto
13_1_40cm_4_scaffold_3460_3
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

2382..2906
DNA (525bp) protein (175aa)
two component transcriptional regulator, winged helix family; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
winged helix family two component transcriptional regulator
13_1_40cm_4_scaffold_3460_4
unknown

Not on your lists

3143..3322
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_4_scaffold_3460_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3334..5169)
DNA (1836bp) protein (612aa)
MCP methyltransferase, CheR-type with PAS/PAC sensor (EC:2.1.1.80) Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
MCP methyltransferase, CheR-type with PAS/PAC sensor (EC:2.1.1.80)
MCP methyltransferase, CheR-type with PAS/PAC sensor n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V6A4_9CYAN
13_1_40cm_4_scaffold_3460_6
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5166..5762)
DNA (597bp) protein (199aa)
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WUP3_9NOST
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain {ECO:0000313|EMBL:AFZ24075.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; C
13_1_40cm_4_scaffold_3460_7
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5773..6888)
DNA (1116bp) protein (372aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=446468 species="Bacteria; Actinobacteria; Streptos
Acetate kinase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QBM4_STANL
acetate kinase
13_1_40cm_4_scaffold_3460_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6876..9257)
DNA (2382bp) protein (794aa)
phosphoketolase (EC:4.1.2.22); K01632 fructose-6-phosphate phosphoketolase [EC:4.1.2.22] Tax=RBG_16_RIF_CHLX_70_13_curated
phosphoketolase (EC:4.1.2.22)
phosphoketolase n=1 Tax=Actinopolymorpha alba RepID=UPI0003809607
13_1_40cm_4_scaffold_3460_9
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9283..9990)
DNA (708bp) protein (236aa)
PAP2 superfamily domain protein n=1 Tax=Arthrobacter aurescens (strain TC1) RepID=A1RAF2_ARTAT
PAP2 superfamily domain protein
Phosphoesterase {ECO:0000313|EMBL:KJK11614.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
13_1_40cm_4_scaffold_3460_10
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

10100..10825
DNA (726bp) protein (242aa)
Tax=RBG_16_Chloroflexi_56_8_curated
13_1_40cm_4_scaffold_3460_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10836..11552)
DNA (717bp) protein (239aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EUN1f RepID=D3CRX6_9ACTO
putative two-component system response transcriptional regulator Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
two component LuxR family transcriptional regulator
13_1_40cm_4_scaffold_3460_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(11549..12484)
DNA (936bp) protein (312aa)
Diacylglycerol kinase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU7_9CHLR
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:EFH90229.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
diacylglycerol kinase catalytic subunit
13_1_40cm_4_scaffold_3460_13
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12486..13427)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QR66_NOSS7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY47873.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
13_1_40cm_4_scaffold_3460_14
unknown

Not on your lists

comp(13783..14835)
DNA (1053bp) protein (351aa)

This feature has no annotations

13_1_40cm_4_scaffold_3460_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15164..15649
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8ELP4_STRRM
Putative membrane protein {ECO:0000313|EMBL:EXG79625.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;
hypothetical protein
13_1_40cm_4_scaffold_3460_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15558..16301)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALS8_9MICO
Phosphatidic acid phosphatase {ECO:0000313|EMBL:KDP92562.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG
putative membrane-associated phospholipid phosphatase
13_1_40cm_4_scaffold_3460_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16437..18128
DNA (1692bp) protein (564aa)
ABC-1 domain-containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKD1_RHOMR
ABC transporter
ABC-1 domain-containing protein {ECO:0000313|EMBL:AEN73184.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
13_1_40cm_4_scaffold_3460_18
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18098..18889
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BM97_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KIL41378.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
hypothetical protein
13_1_40cm_4_scaffold_3460_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19007..20215
DNA (1209bp) protein (403aa)
Histidine kinase n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KI30_STRRC
signal transduction histidine kinase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
histidine kinase
13_1_40cm_4_scaffold_3460_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20189..21016)
DNA (828bp) protein (276aa)
potassium channel protein n=1 Tax=Brevibacillus brevis RepID=UPI00037440B5
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
potassium channel
13_1_40cm_4_scaffold_3460_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21106..22071)
DNA (966bp) protein (322aa)
Inner-membrane translocator n=1 Tax=Thermincola potens (strain JR) RepID=D5XD96_THEPJ
inner-membrane translocator; K02057 simple sugar transport system permease protein Tax=RBG_16_Actinobacteria_68_12_curated
inner-membrane translocator
13_1_40cm_4_scaffold_3460_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22068..23165)
DNA (1098bp) protein (366aa)
ABC transporter permease; K02057 simple sugar transport system permease protein Tax=RBG_16_Actinobacteria_68_12_curated
ABC transporter permease; K02057 simple sugar transport system permease protein id=14628149 bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ABC transporter permease
13_1_40cm_4_scaffold_3460_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(23162..24700)
DNA (1539bp) protein (513aa)
putative ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] Tax=RBG_16_Actinobacteria_68_12_curated
Putative ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ22_CALAS
putative ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_3460_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24725..25816)
DNA (1092bp) protein (364aa)
Nucleoside-binding protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH38_MOOTA
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins Tax=RBG_16_Actinobacteria_68_12_curated
basic membrane lipoprotein
13_1_40cm_4_scaffold_3460_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

25984..26394
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C922_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40315.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_4_scaffold_3460_26
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

26391..27608
DNA (1218bp) protein (406aa)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYV4_9CHLR
hydantase: amidase, hydantoinase/carbamoylase family
Hydantase: amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:AHY46590.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; R
13_1_40cm_4_scaffold_3460_27
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

27605..28915
DNA (1311bp) protein (437aa)
Allantoinase {ECO:0000256|HAMAP-Rule:MF_01645}; EC=3.5.2.5 {ECO:0000256|HAMAP-Rule:MF_01645};; Allantoin-utilizing enzyme {ECO:0000256|HAMAP-Rule:MF_01645}; TaxID=485913 species="Bacteria; Chloroflexi
dihydroorotase, multifunctional complex type (EC:3.5.2.5)
Allantoinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYV3_9CHLR
13_1_40cm_4_scaffold_3460_28
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28987..30315)
DNA (1329bp) protein (443aa)
Amidohydrolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS78_RUBXD
Cytosine deaminase and related metal-dependent hydrolase
Cytosine deaminase and related metal-dependent hydrolase {ECO:0000313|EMBL:AHY46583.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteracea
13_1_40cm_4_scaffold_3460_29
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30353..32671)
DNA (2319bp) protein (773aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABG05751.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABG05751.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria;
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS77_RUBXD
13_1_40cm_4_scaffold_3460_30
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32668..33120)
DNA (453bp) protein (151aa)
(2Fe-2S)-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS79_RUBXD
(2Fe-2S)-binding protein
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ABG05749.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubro
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