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13_1_40cm_4_scaffold_3684

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3684_1
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..541)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KRP2_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST34772.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
hypothetical protein
13_1_40cm_4_scaffold_3684_2
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(587..1015)
DNA (429bp) protein (143aa)
Smu12A n=1 Tax=Streptomyces sp. AA4 RepID=D9UXL3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH94242.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_4_scaffold_3684_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1102..3183
DNA (2082bp) protein (694aa)
Multidrug ABC transporter ATPase/permease n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IHS4_9PSEU
multidrug ABC transporter ATPase/permease
Multidrug ABC transporter ATPase/permease {ECO:0000313|EMBL:AHH97062.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida D
13_1_40cm_4_scaffold_3684_4
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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3211..4557
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z4M2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63512.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
13_1_40cm_4_scaffold_3684_5
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(4784..5002)
DNA (219bp) protein (73aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003747EA8
transcriptional coactivator/pterin dehydratase
13_1_40cm_4_scaffold_3684_trna_1
unknown

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5143..5214
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_3684_trna_2
unknown

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5227..5300
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_3684_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5672..6304)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000362C418
TetR transcriptional regulator Tax=RBG_16_RIF_CHLX_72_14_curated
TetR family transcriptional regulator
13_1_40cm_4_scaffold_3684_7
unknown

Not on your lists

comp(6436..7260)
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_40cm_4_scaffold_3684_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7834..8970
DNA (1137bp) protein (379aa)
Putative multicopper oxidase-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6U9_STRRD
multicopper oxidase-like protein
Putative multicopper oxidase-like protein {ECO:0000313|EMBL:ACZ87687.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Strepto
13_1_40cm_4_scaffold_3684_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8977..9633
DNA (657bp) protein (219aa)
Multicopper oxidase type 3 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVJ6_9CHLR
Multicopper oxidase type 3 {ECO:0000313|EMBL:EFH85399.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
multicopper oxidase type 3
13_1_40cm_4_scaffold_3684_10
unknown

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9704..10051
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_3684_11
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10618..10959
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KEP24233.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
13_1_40cm_4_scaffold_3684_12
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11255..11521
DNA (267bp) protein (89aa)
Putative DNA-binding protein, CopG family n=2 Tax=Mycobacterium canettii RepID=L0Q1F4_9MYCO
Putative DNA-binding protein, CopG family
Antitoxin VapB48 {ECO:0000313|EMBL:KCN17793.1}; TaxID=1423445 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycob
13_1_40cm_4_scaffold_3684_13
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11518..11988
DNA (471bp) protein (157aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
ribonuclease n=1 Tax=Mycobacterium tuberculosis RepID=UPI0002DA385C
hypothetical protein
13_1_40cm_4_scaffold_3684_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12029..13225)
DNA (1197bp) protein (399aa)
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ30200.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
13_1_40cm_4_scaffold_3684_15
unknown

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comp(13222..13410)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_3684_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13484..14146
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003651905
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEF62040.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.
putative TetR-family transcriptional regulator
13_1_40cm_4_scaffold_3684_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14245..14667
DNA (423bp) protein (141aa)
Hemoglobin-like protein HbN (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7L8_9BACT
Truncated hemoglobin {ECO:0000313|EMBL:CDM65492.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glbN; hemoglobin-like protein HBN
13_1_40cm_4_scaffold_3684_18
unknown

Not on your lists

14796..15329
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_40cm_4_scaffold_3684_19
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15363..16160
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IJY8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF31040.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. C
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_3684_20
unknown

Not on your lists

comp(16162..16713)
DNA (552bp) protein (184aa)

This feature has no annotations

Displaying 22 items

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