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13_1_40cm_4_scaffold_43587

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_43587_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2..178
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIS9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43166.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_43587_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(175..2121)
DNA (1947bp) protein (649aa)
adenylate cyclase (EC:4.6.1.1)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000303B52F
Cyclase {ECO:0000313|EMBL:KJC56780.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
13_1_40cm_4_scaffold_43587_3
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2151..3299)
DNA (1149bp) protein (383aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM43975.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
Adenylate and Guanylate cyclase catalytic domain protein id=3715820 bin=GWF2_Methylomirabilis_70_14 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenylate/guanylate cyclase
13_1_40cm_4_scaffold_43587_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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3990..4349
DNA (360bp) protein (120aa)
DGPF domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFD5_MYXSD
DGPF domain-containing protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
DGPF domain-containing protein
13_1_40cm_4_scaffold_43587_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4646..5581
DNA (936bp) protein (312aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YZ97_9ACTO
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89683.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_43587_6
unknown

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5623..5733
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_4_scaffold_43587_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5758..6498
DNA (741bp) protein (247aa)
ABC transporter
ABC transporter ATP-binding protein id=3138543 bin=GWC2_Methylomirabilis_70_24 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_43587_8
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6495..7268
DNA (774bp) protein (258aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003152440
ABC transporter permease {ECO:0000313|EMBL:KJC54263.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
ABC transporter permease
13_1_40cm_4_scaffold_43587_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7294..8127
DNA (834bp) protein (278aa)
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Membrane lipoprotein lipid attachment site id=2817368 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twin-arginine translocation pathway signal
Displaying 9 items

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