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13_1_40cm_4_scaffold_423

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_423_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1335)
DNA (1335bp) protein (445aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-) Tax=GWC2_Rokubacteria_70_16_curated
putative fatty-acid--CoA ligase (EC:6.2.1.-)
AMP-dependent synthetase and ligase id=4143225 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_423_2
unknown

Not on your lists

comp(1355..2740)
DNA (1386bp) protein (462aa)

This feature has no annotations

13_1_40cm_4_scaffold_423_3
unknown

Not on your lists

3025..3321
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_423_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(3322..3744)
DNA (423bp) protein (141aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Streptomyces sp. SM8 RepID=K1VWN0_9ACTO
histidine triad (HIT) protein Tax=CG_Pacearch_06
histidine triad (HIT) protein
13_1_40cm_4_scaffold_423_5
Trichoderma virens, Trichoderma, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(3770..6196)
DNA (2427bp) protein (809aa)
prkC; serine/threonine-protein kinase PrkC (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Hypocrea virens (strain Gv29-8 / FGSC 10586) RepID=G9MSN2_HYPVG
Uncharacterized protein {ECO:0000313|EMBL:EHK22193.1}; TaxID=413071 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trich
13_1_40cm_4_scaffold_423_6
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6361..7848
DNA (1488bp) protein (496aa)
trimethylamine methyltransferase n=1 Tax=Serinicoccus profundi RepID=UPI000255F833
Manganese transport regulator MntR {ECO:0000313|EMBL:CCI54993.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben
trimethylamine methyltransferase subfamily protein
13_1_40cm_4_scaffold_423_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7793..8449
DNA (657bp) protein (219aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D0P3_9BACT
glutamate formimidoyltransferase
13_1_40cm_4_scaffold_423_8
unknown

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comp(8358..8804)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_423_9
R_NC10_66_22, NC10, Bacteria

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comp(8797..9087)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00038114E1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_4_scaffold_423_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9095..9679)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I432_CALAS
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_1_40cm_4_scaffold_423_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9676..11502)
DNA (1827bp) protein (609aa)
metal-binding protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Uncharacterized protein id=4954671 bin=GWC2_Chloroflexi_73_18 species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ferredoxin
13_1_40cm_4_scaffold_423_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11499..12362)
DNA (864bp) protein (288aa)
hypothetical protein; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=GWC2_RIF_CHLX_73_18_curated
Uncharacterized protein id=4954672 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_423_13
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12370..13092)
DNA (723bp) protein (241aa)
corrinoid methyltransferase n=1 Tax=actinobacterium SCGC AAA023-J06 RepID=UPI00037910B3
Dimethylamine corrinoid protein {ECO:0000313|EMBL:CCI54991.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74
methyltransferase cognate corrinoid protein
13_1_40cm_4_scaffold_423_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13171..13971
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXZ1_RUBXD
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABG03737.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_1_40cm_4_scaffold_423_15
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14115..15233
DNA (1119bp) protein (373aa)
ABC transporter substrate-binding protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037B293D
putative ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAL90497.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinop
13_1_40cm_4_scaffold_423_16
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15275..16129
DNA (855bp) protein (285aa)
ABC transporter permease n=1 Tax=Actinoplanes globisporus RepID=UPI00037DA1F0
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AGZ42460.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 735
13_1_40cm_4_scaffold_423_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16126..16992
DNA (867bp) protein (289aa)
ABC-type transporter, permease subunit n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K051_SACES
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EXG79581.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.
ABC-type transporter, permease subunit
13_1_40cm_4_scaffold_423_18
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16989..18086
DNA (1098bp) protein (366aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HBW3_ACTM4
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL90500.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes
13_1_40cm_4_scaffold_423_19
Actinomadura atramentaria, Actinomadura, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

18094..18405
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003602C01
Displaying 19 items

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