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13_1_40cm_4_scaffold_486

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_486_1
unknown

Not on your lists

comp(97..651)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_4_scaffold_486_2
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(895..1362)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036B32AD
MarR family transcriptional regulator {ECO:0000313|EMBL:EYT82296.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6
hypothetical protein
13_1_40cm_4_scaffold_486_3
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1380..2141)
DNA (762bp) protein (254aa)
ArsR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B48F28
SPG23_c9, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28629.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_486_4
unknown

Not on your lists

2221..3447
DNA (1227bp) protein (409aa)

This feature has no annotations

13_1_40cm_4_scaffold_486_5
unknown

Not on your lists

comp(3295..4677)
DNA (1383bp) protein (461aa)

This feature has no annotations

13_1_40cm_4_scaffold_486_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

4696..5220
DNA (525bp) protein (175aa)
CHRD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein id=14630359 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin8_Chloro organism_group=Chloroflexi
CHRD domain-containing protein
13_1_40cm_4_scaffold_486_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

5371..5724
DNA (354bp) protein (118aa)
YCII-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCI2_9CHLR
YCII-related protein {ECO:0000313|EMBL:EFH89999.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemife
DGPF domain-containing protein
13_1_40cm_4_scaffold_486_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

5726..6937
DNA (1212bp) protein (404aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCI3_9CHLR
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH90000.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
putative ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_486_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6944..7354)
DNA (411bp) protein (137aa)
MarR family transcriptional regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MH54_CORCM
mprA1; MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AFE09475.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.
13_1_40cm_4_scaffold_486_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7440..8063
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK35300.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
Putative uncharacterized protein id=1961653 bin=GWB2_Chloroflexi_49_20 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_486_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8117..8536
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003659544
Uncharacterized protein {ECO:0000313|EMBL:ETK36612.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
secreted protein
13_1_40cm_4_scaffold_486_12
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

8638..9303
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW13699.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Methyltransferase type 11
methyltransferase type 11 id=28203 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
13_1_40cm_4_scaffold_486_13
unknown

Not on your lists

9309..9599
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_486_14
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9596..10402)
DNA (807bp) protein (269aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D408E
Inner membrane ABC transporter permease protein {ECO:0000313|EMBL:KEZ77511.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.
spermidine/putrescine ABC transporter permease protein
13_1_40cm_4_scaffold_486_15
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10406..11389)
DNA (984bp) protein (328aa)
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KEZ77512.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaerace
spermidine/putrescine ABC transporter permease id=4195233 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
potH; binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_486_16
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11514..12689)
DNA (1176bp) protein (392aa)
transporter n=1 Tax=Acetobacter aceti RepID=UPI00022607F0
Transporter substrate-binding periplasmic protein {ECO:0000313|EMBL:GAN57625.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; A
ABC transporter binding protein
13_1_40cm_4_scaffold_486_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(12737..13567)
DNA (831bp) protein (277aa)
putative ABC transporter ATP-binding protein Tax=RBG_16_Chloroflexi_63_12_curated
spermidine/putrescine ABC transporter ATPase id=4195235 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Putative ABC transporter ATP-binding protein YdcT
13_1_40cm_4_scaffold_486_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13780..15225)
DNA (1446bp) protein (482aa)
aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:ADB49980.1}; EC=1.2.1.19 {ECO:0000313|EMBL:ADB49980.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexi
Aminobutyraldehyde dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F004_CONWI
13_1_40cm_4_scaffold_486_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15222..15515)
DNA (294bp) protein (98aa)
gabT; 4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
4-aminobutyrate aminotransferase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L472_KORCO
4-aminobutyrate aminotransferase
Displaying 19 items

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