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13_1_40cm_4_scaffold_564

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_564_1
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(1..135)
DNA (135bp) protein (45aa)
oxidoreductase family, NAD-binding Rossmann fold protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
13_1_40cm_4_scaffold_564_2
unknown

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comp(321..755)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_3

Not on your lists

comp(945..1220)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BIR0_DEHSV
Marine sediment metagenome DNA, contig: S12H4_S10905 {ECO:0000313|EMBL:GAJ07034.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_564_4
unknown

Not on your lists

comp(1397..1954)
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_5
unknown

Not on your lists

comp(1951..2154)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_6
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2190..2855)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003679194
epoxide hydrolase
Putative epoxide hydrolase {ECO:0000313|EMBL:CAJ59953.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
13_1_40cm_4_scaffold_564_7
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2892..3374)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZG0_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07133.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_4_scaffold_564_8
unknown

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comp(3445..3780)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_9
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3806..4018)
DNA (213bp) protein (71aa)
Uncharacterized protein id=1849874 bin=GWD2_Bacteroidetes_33_33 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein; K09165 hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
13_1_40cm_4_scaffold_564_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4159..4761)
DNA (603bp) protein (201aa)
DNA topology modulation protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WLC5_BACSK
topology modulation protein
Topology modulation protein {ECO:0000313|EMBL:AHG88238.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_564_11
unknown

Not on your lists

comp(4730..5035)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_12
unknown

Not on your lists

comp(5364..5654)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5828..6286)
DNA (459bp) protein (153aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVA0_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA23164.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
13_1_40cm_4_scaffold_564_14
unknown

Not on your lists

comp(6413..6838)
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_15
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6887..7171)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KGB58856.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
13_1_40cm_4_scaffold_564_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7202..8500)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z4G2_BELBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89005.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_564_17
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8491..8901)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3D3_STANL
Uncharacterized protein {ECO:0000313|EMBL:KII00226.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
13_1_40cm_4_scaffold_564_18
unknown

Not on your lists

comp(8971..9093)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_19
unknown

Not on your lists

comp(9105..9320)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_20
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9508..10326)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003641ABC
Putative methyltransferase {ECO:0000313|EMBL:GAB92129.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
methyltransferase type 11
13_1_40cm_4_scaffold_564_21
unknown

Not on your lists

comp(10357..10872)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10879..11301)
DNA (423bp) protein (141aa)
id=5223968 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
id=5223968 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_4_scaffold_564_23
unknown

Not on your lists

comp(11399..11749)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_564_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11772..13301)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003774C23
FAD linked oxidase domain-containing protein
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:AHG88483.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_564_25
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13517..14467
DNA (951bp) protein (317aa)
Integrase core domain protein n=1 Tax=Vibrio cholerae HE-16 RepID=K2WME2_VIBCL
integrase core domain protein
Integrase core domain protein {ECO:0000313|EMBL:KFE25283.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
13_1_40cm_4_scaffold_564_26
unknown

Not on your lists

comp(14601..14813)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 26 items

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