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13_1_40cm_4_scaffold_1910_3

Organism: 13_1_40CM_4_Actinobacteria_65_12

partial RP 17 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 6 / 38
Location: comp(1245..2126)

Top 3 Functional Annotations

Value Algorithm Source
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1247227 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 291.0
  • Bit_score: 396
  • Evalue 3.10e-107
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:EJJ08262.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aura similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 292.0
  • Bit_score: 387
  • Evalue 2.00e-104
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 289.0
  • Bit_score: 364
  • Evalue 2.80e-98

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Taxonomy

Streptomyces auratus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGACGATGGACGAGCGTGAGTGGTTGGCCGAGCGGTTCGAGGAGAACCGGACCCACCTCCGCGGAGTGGCGTACCGAATGCTTGGTTCGCCGAGCGAGGCTGACGACGCCGTCCAGGAGGCCTGGCTGCGGCTCAGCCGCTCGGGCGTGAGCGGCGTCGAGAACCTCGGCGGATGGCTGACCACGGTAGTCGCCCGGGTTTGCCTGGACATGCTGCGCTCGCGCAAGTCGAGGCGCGAGGACCCGTTCGACACGCACCTGCCTGATGCGGACGTGAGCCTATATGTCGCCGGCGACCCAGAGCACGAGGCGATGCTGGCCGATTCTGTCGGCCTGGCGCTGCTCGTGGTGCTGGAAAGGTTGGCTCCCGCGGAGCGGGTCGCATTCGTCCTGCACGACATGTTCGCGATGCCGTTTGACGACATCGCCGCCATCGTGGGCCGGTCCCCGACCGCTGCGCGGCAGCTCGCGAGCCGCGCACGCCGCCGGGTCCAGGGAGCCACGGCGGATGATGGCGCTGATCCCGTCCGCCAGCGAGAAGTCGTCGATGCCTTCCTTGCCGCCTCACGTGGTGGTGACTTCGCCGCCCTCATTGCGATGCTCGACCCCGACGTCGTGCTCCGAGCGGACCGCACGGCCTCACGTATGGGCGCCGCCAAGTTGGTCCGCGGCGCCGCGGCGGTGGCCGGCACCTTCTCGGGTCGGGCCAGGGTCGCTCAGCCGGCGCTGGTGAACGGAACCCCGGGACTGGTGTGGGCTTCGGGCGGGCGGCCGCGTGTCGTGTTCGCCTTCACGTTGAAGAGCGGGAAGATCGTTGAGATCGACATGCTTGCCGATCCCGAACGGCTTGGGGCGCTCGACCTGGCCATCCTCGGCGGCTGA
PROTEIN sequence
Length: 294
MTMDEREWLAERFEENRTHLRGVAYRMLGSPSEADDAVQEAWLRLSRSGVSGVENLGGWLTTVVARVCLDMLRSRKSRREDPFDTHLPDADVSLYVAGDPEHEAMLADSVGLALLVVLERLAPAERVAFVLHDMFAMPFDDIAAIVGRSPTAARQLASRARRRVQGATADDGADPVRQREVVDAFLAASRGGDFAALIAMLDPDVVLRADRTASRMGAAKLVRGAAAVAGTFSGRARVAQPALVNGTPGLVWASGGRPRVVFAFTLKSGKIVEIDMLADPERLGALDLAILGG*