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13_1_40cm_4_scaffold_1910

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1910_1
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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358..732
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003482520
ArsR family transcriptional regulator Tax=RBG_13_Chloroflexi_60_13_curated
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_1910_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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695..1204
DNA (510bp) protein (170aa)
Putative glutathione S-transferase-related transmembrane protein {ECO:0000313|EMBL:AKB60755.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AKB60755.1};; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrob
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK15_METAC
hypothetical protein
13_1_40cm_4_scaffold_1910_3
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1245..2126)
DNA (882bp) protein (294aa)
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1247227 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:EJJ08262.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aura
ECF subfamily RNA polymerase sigma factor
13_1_40cm_4_scaffold_1910_4
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2168..3016)
DNA (849bp) protein (283aa)
alpha/beta hydrolase n=1 Tax=Streptomyces chartreusis RepID=UPI000262F876
Alpha/beta hydrolase {ECO:0000313|EMBL:KDN79460.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
13_1_40cm_4_scaffold_1910_5
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3091..3498)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034B77DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAM00777.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (
13_1_40cm_4_scaffold_1910_6
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3578..3949
DNA (372bp) protein (124aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V349_9MICC
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMY34429.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_1910_7
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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comp(3946..4737)
DNA (792bp) protein (264aa)
ABC-2 type transporter n=1 Tax=Ornithinibacillus scapharcae TW25 RepID=UPI000225BAD7 id=1244684 bin=RBG9 species=Ornithinibacillus scapharcae genus=Ornithinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG9 organism_group=Chloroflexi
ABC-2 type transporter Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
hypothetical protein
13_1_40cm_4_scaffold_1910_8
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(4734..5513)
DNA (780bp) protein (260aa)
ABC-2 type transporter n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM43_CLOPH id=1244683 bin=RBG9 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG9 organism_group=Chloroflexi
hypothetical protein; K09686 antibiotic transport system permease protein Tax=RBG_16_Chloroflexi_64_43_curated
hypothetical protein
13_1_40cm_4_scaffold_1910_9
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(5510..6502)
DNA (993bp) protein (331aa)
ABC transporter, ATP-binding protein Tax=RBG_13_Chloroflexi_66_10_curated
sro:Sros_4307 daunorubicin resistance ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein id=1244682 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
daunorubicin ABC transporter ATPase
13_1_40cm_4_scaffold_1910_10
unknown

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comp(6557..6679)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_4_scaffold_1910_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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6937..9120
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH90231.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
13_1_40cm_4_scaffold_1910_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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9145..10035
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVM1_CATAD
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACU69377.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
13_1_40cm_4_scaffold_1910_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10032..10343)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK61_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85073.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
Displaying 13 items

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