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13_1_40cm_4_scaffold_1521

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1521_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..831)
DNA (831bp) protein (277aa)
Diphthamide biosynthesis protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW9_NITGG
diphthamide biosynthesis protein
Diphthamide biosynthesis protein {ECO:0000313|EMBL:AFU57708.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_4_scaffold_1521_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1464..2399)
DNA (936bp) protein (312aa)
Putative ATPase, PP-loop superfamily n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC3_NITGG
ATPase, PP-loop superfamily rbh
Putative ATPase, PP-loop superfamily {ECO:0000313|EMBL:AFU57764.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Ni
13_1_40cm_4_scaffold_1521_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2507..2704
DNA (198bp) protein (66aa)
Putative HTH-type transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG29_NITGG
HTH-type transcriptional regulator, AsnC family
Putative HTH-type transcriptional regulator, AsnC family {ECO:0000313|EMBL:AFU57763.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosos
13_1_40cm_4_scaffold_1521_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2985..3197
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I907_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57761.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1521_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3466..3864)
DNA (399bp) protein (133aa)
DUF126 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIB4_NITGG
hypothetical protein
DUF126 domain-containing protein {ECO:0000313|EMBL:AFU57757.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_4_scaffold_1521_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3861..5045)
DNA (1185bp) protein (395aa)
Putative aconitase subunit 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I906_NITGG
aconitase subunit 1 rbh
Putative aconitase subunit 1 {ECO:0000313|EMBL:AFU57756.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
13_1_40cm_4_scaffold_1521_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5097..5753
DNA (657bp) protein (219aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1237085 species=
Endonuclease III n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC1_NITGG
endonuclease III rbh
13_1_40cm_4_scaffold_1521_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5731..6420)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG19_NITGG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU57753.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1521_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6763..7923
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I902_NITGG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU57751.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1521_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8178..8480
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDK1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57750.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1521_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8738..11662
DNA (2925bp) protein (975aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57749.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1521_12
unknown

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12424..12699
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_1521_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12717..13052)
DNA (336bp) protein (112aa)
Putative signal transduction response regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICC7_NITGG
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AIF83557.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales;
13_1_40cm_4_scaffold_1521_14
unknown

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13069..13536
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_40cm_4_scaffold_1521_15
RLO_PLX_64_10, Bacteria

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comp(13437..14243)
DNA (807bp) protein (269aa)
translocation protein TolB n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
TolB-like biopolymer transport periplasmic beta-propeller repeat protein
Displaying 15 items

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