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13_1_40cm_4_scaffold_1896

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1896_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..176
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF82395.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
hypothetical protein
13_1_40cm_4_scaffold_1896_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(684..1064)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JG14_9ARCH
lactoylglutathione lyase family protein
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:AIF82908.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_4_scaffold_1896_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1139..1552
DNA (414bp) protein (138aa)
Transcriptional regulator, HxlR family n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1P2_NITMS
Transcriptional regulator, HxlR family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AIC15796.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_4_scaffold_1896_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1649..2170)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INI1_NITGG
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC16207.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_1896_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(2253..2663)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV35_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06424.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_1896_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2714..3010)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDE0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59411.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1896_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3203..3634
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJR6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15661.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_1896_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3710..4960
DNA (1251bp) protein (417aa)
Intradiol ring-cleavage dioxygenase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJL0_ROSCS
protocatechuate 3,4-dioxygenase beta subunit
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:AIF84954.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" so
13_1_40cm_4_scaffold_1896_9
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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5045..5704
DNA (660bp) protein (220aa)
Regulatory protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVX6_THEON
Transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AHF80125.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus p
13_1_40cm_4_scaffold_1896_10

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5704..6048
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=G3C919_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC55511.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_4_scaffold_1896_11
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6052..6663)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK30_THEYD
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
13_1_40cm_4_scaffold_1896_12
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6660..7424)
DNA (765bp) protein (255aa)
Heme exporter protein B, putative n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK31_THEYD
heme exporter protein B
Heme exporter protein B, putative {ECO:0000313|EMBL:ACI21800.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowst
13_1_40cm_4_scaffold_1896_13
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7430..8485)
DNA (1056bp) protein (352aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPU3_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX41842.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394
13_1_40cm_4_scaffold_1896_14
unknown

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comp(8457..8708)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_1896_15
unknown

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comp(8734..9405)
DNA (672bp) protein (224aa)

This feature has no annotations

13_1_40cm_4_scaffold_1896_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9657..10073)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEH4_NITGG
Glyoxalase-like domain
Glyoxalase-like domain {ECO:0000313|EMBL:AIF82617.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitro
13_1_40cm_4_scaffold_1896_17
unknown

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comp(10180..10293)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 17 items

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