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13_1_40cm_4_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_239_1
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2..244
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TK72_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL16454.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerul
13_1_40cm_4_scaffold_239_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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302..1360
DNA (1059bp) protein (353aa)
adh4; putative NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
Putative NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AIC16707.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AIC16707.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales
Putative NAD-dependent alcohol dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH0_NITGG
13_1_40cm_4_scaffold_239_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1385..2251
DNA (867bp) protein (289aa)
citE; citrate/citryl-CoA lyase (EC:4.1.3.6 4.1.3.34)
Putative citrate/ citryl-CoA lyase {ECO:0000313|EMBL:AFU57075.1}; EC=4.1.3.34 {ECO:0000313|EMBL:AFU57075.1};; EC=4.1.3.6 {ECO:0000313|EMBL:AFU57075.1};; TaxID=1237085 species="Archaea; Thaumarchaeota;
Putative citrate/ citryl-CoA lyase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBZ8_NITGG
13_1_40cm_4_scaffold_239_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2797..3648)
DNA (852bp) protein (284aa)
Arsenical resistance-3 family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE33_NITGG
arsenical resistance-3 family protein rbh
Arsenical resistance-3 family protein {ECO:0000313|EMBL:AFU57078.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_4_scaffold_239_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3683..5512)
DNA (1830bp) protein (610aa)
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:AFU57079.1}; EC=3.4.24.- {ECO:0000313|EMBL:AFU57079.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitros
pepF; oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase, pepF/M3 family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH2_NITGG
13_1_40cm_4_scaffold_239_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5573..5992
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC01_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57080.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_239_7
unknown

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comp(5931..6239)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_239_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6460..6966)
DNA (507bp) protein (169aa)
RDD family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I736_NITGG
RDD family protein
RDD family protein {ECO:0000313|EMBL:AFU57081.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garge
13_1_40cm_4_scaffold_239_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7085..8056)
DNA (972bp) protein (324aa)
SCP domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH6_NITGG
SCP domain-containing protein rbh
SCP domain-containing protein {ECO:0000313|EMBL:AFU57084.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososp
13_1_40cm_4_scaffold_239_10

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comp(8318..8806)
DNA (489bp) protein (163aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
Hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:AIF10957.1}; TaxID=1456168 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_239_11

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comp(8787..8942)
DNA (156bp) protein (52aa)
Ribonuclease J protein {ECO:0000313|EMBL:KFM18352.1}; EC=3.1.-.- {ECO:0000313|EMBL:KFM18352.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
13_1_40cm_4_scaffold_239_12

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comp(8885..9316)
DNA (432bp) protein (144aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
Hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:AIF07181.1}; TaxID=1456093 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3
hypothetical protein
13_1_40cm_4_scaffold_239_13
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9324..9497)
DNA (174bp) protein (58aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
Uncharacterized protein {ECO:0000313|EMBL:EPA06188.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
metallo-beta-lactamase superfamily hydrolase
13_1_40cm_4_scaffold_239_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9656..10237)
DNA (582bp) protein (194aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1237085 species="Archaea; Thaumarc
GTP cyclohydrolase 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC10_NITGG
13_1_40cm_4_scaffold_239_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10248..10985)
DNA (738bp) protein (246aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Archaeosine biosynthesis pro
Radical SAM domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I746_NITGG
radical SAM domain-containing protein rbh
13_1_40cm_4_scaffold_239_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10942..11682)
DNA (741bp) protein (247aa)
queC1; 7-cyano-7-deazaguanine synthase (EC:6.3.-.-)
7-cyano-7-deazaguanine synthase {ECO:0000313|EMBL:AFU57092.1}; EC=6.3.-.- {ECO:0000313|EMBL:AFU57092.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososph
7-cyano-7-deazaguanine synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGZ1_NITGG
13_1_40cm_4_scaffold_239_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11704..12033)
DNA (330bp) protein (110aa)
Putative enolase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE49_NITGG
enolase
Putative enolase {ECO:0000313|EMBL:AFU57093.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargens
13_1_40cm_4_scaffold_239_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12217..13419
DNA (1203bp) protein (401aa)
GTP binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI1_NITGG
GTP binding protein rbh
GTP binding protein {ECO:0000313|EMBL:AFU57094.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garg
13_1_40cm_4_scaffold_239_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13422..14414
DNA (993bp) protein (331aa)
Putative metalloendopeptidase glycoprotease family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC21_NITGG
metalloendopeptidase glycoprotease family
Putative metalloendopeptidase glycoprotease family {ECO:0000313|EMBL:AFU57095.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_4_scaffold_239_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14398..14718)
DNA (321bp) protein (107aa)
GRAM domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I751_NITGG
GRAM domain-containing protein
GRAM domain-containing protein {ECO:0000313|EMBL:AFU57096.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
13_1_40cm_4_scaffold_239_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14767..15363
DNA (597bp) protein (199aa)
Putative Mn2+-dependent serine/threonine protein kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH02_NITGG
Mn2+-dependent serine/threonine protein kinase
Putative Mn2+-dependent serine/threonine protein kinase {ECO:0000313|EMBL:AFU57097.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososp
13_1_40cm_4_scaffold_239_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15366..15914
DNA (549bp) protein (183aa)
Putative nucleoside-triphosphatase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE54_NITGG
nucleoside-triphosphatase
Putative nucleoside-triphosphatase {ECO:0000313|EMBL:AFU57098.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr
13_1_40cm_4_scaffold_239_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15909..16943)
DNA (1035bp) protein (345aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
Wyosine base formation domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI4_NITGG
wyosine base formation domain-containing protein rbh
13_1_40cm_4_scaffold_239_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16953..17663
DNA (711bp) protein (237aa)
NIFsuperfamily domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC27_NITGG
NIFsuperfamily domain-containing protein
NIFsuperfamily domain-containing protein {ECO:0000313|EMBL:AFU57100.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_4_scaffold_239_trna_1
unknown

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17861..17963
DNA (103bp)
transferRNA
13_1_40cm_4_scaffold_239_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18026..18871)
DNA (846bp) protein (282aa)
A2M superfamily domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH14_NITGG
A2M superfamily domain-containing protein rbh
A2M superfamily domain-containing protein {ECO:0000313|EMBL:AFU57102.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
13_1_40cm_4_scaffold_239_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19114..19362
DNA (249bp) protein (83aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaeral
DNA-directed RNA polymerase subunit H n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE60_NITGG
13_1_40cm_4_scaffold_239_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19370..22720
DNA (3351bp) protein (1117aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososph
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILI7_NITGG
13_1_40cm_4_scaffold_239_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22738..26553
DNA (3816bp) protein (1272aa)
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphae
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG
13_1_40cm_4_scaffold_239_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26528..26842
DNA (315bp) protein (105aa)
50S ribosomal protein L30e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0I766_NITGG
rpl30e; 50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000313|EMBL:AFU57106.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
Displaying items 1-30 of 35 in total

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