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13_1_40cm_4_scaffold_3494

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3494_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(149..382)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFF1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60096.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_2
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(603..1400)
DNA (798bp) protein (266aa)
Amidohydrolase 2 n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BE09_9ARCH
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AFS83277.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
13_1_40cm_4_scaffold_3494_3
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1408..1968)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Nitrosopumilaceae RepID=K0BA88_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81361.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_4_scaffold_3494_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2193..2438)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILC1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56994.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3041..3292
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7H2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14550.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_3494_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3490..3729
DNA (240bp) protein (80aa)
TRAM domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBW5_NITGG
putative RNA-binding protein, contains TRAM domain
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:AIF83749.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_4_scaffold_3494_trna_1
unknown

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comp(3885..3968)
DNA (84bp)
transferRNA
13_1_40cm_4_scaffold_3494_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4298..4663
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJK8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59383.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4664..5191)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL97_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59382.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5229..5780)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA8_NITGG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59381.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5852..6598)
DNA (747bp) protein (249aa)
cofE2; F420-0:gamma-L-glutamate ligase (EC:6.3.2.-)
F420-0:gamma-L-glutamate ligase {ECO:0000313|EMBL:AFU59380.1}; EC=6.3.2.- {ECO:0000313|EMBL:AFU59380.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososph
F420-0:gamma-L-glutamate ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHH5_NITGG
13_1_40cm_4_scaffold_3494_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6698..7972
DNA (1275bp) protein (425aa)
leuC2; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH4_NITGG
13_1_40cm_4_scaffold_3494_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7969..8466
DNA (498bp) protein (166aa)
leuD2; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) rbh
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJK4_NITGG
13_1_40cm_4_scaffold_3494_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8775..9014
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59376.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9011..9577)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHH3_NITGG
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59375.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9577..10047)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59374.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10244..10528
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL92_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59372.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10530..10700)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59371.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_18
unknown

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10751..11155
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_3494_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11073..11576)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59369.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_3494_20
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11759..12031
DNA (273bp) protein (91aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJJ8_NITGG
putative transcriptional regulator, AsnC family
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIC17273.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
Displaying 21 items

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