ggKbase home page

13_1_40cm_4_scaffold_93

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_93_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3..176)
DNA (174bp) protein (58aa)
Putative 5 10-methylenetetrahydrofolate reductase-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I853_NITGG
5 10-methylenetetrahydrofolate reductase-like protein
Putative 5 10-methylenetetrahydrofolate reductase-like protein {ECO:0000313|EMBL:AFU57451.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Ni
13_1_40cm_4_scaffold_93_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

194..832
DNA (639bp) protein (213aa)
Putative NUDIX hydrolase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU4_NITGG
NUDIX hydrolase
Putative NUDIX hydrolase {ECO:0000313|EMBL:AFU57452.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_3
unknown

Not on your lists

comp(1084..1380)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_93_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1643..2113
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHX0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57497.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2159..2860
DNA (702bp) protein (234aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF98_NITGG
13_1_40cm_4_scaffold_93_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


3267..4706
DNA (1440bp) protein (480aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1237085 species="Archaea; Thau
Arginine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM12_NITGG
13_1_40cm_4_scaffold_93_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4895..5872
DNA (978bp) protein (326aa)
Putative tRNA methyltransferase complex GCD14 subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8A3_NITGG
tRNA methyltransferase complex GCD14 subunit
Putative tRNA methyltransferase complex GCD14 subunit {ECO:0000313|EMBL:AFU57501.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosospha
13_1_40cm_4_scaffold_93_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5905..6384
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHX4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57502.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6381..6914)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57503.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6945..8114)
DNA (1170bp) protein (390aa)
Transcriptional regulator, TrmB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8A8_NITGG
transcriptional regulator TrmB
Transcriptional regulator, TrmB {ECO:0000313|EMBL:AFU57506.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_4_scaffold_93_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8236..8904
DNA (669bp) protein (223aa)
SNF7-domain-containing protein n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IHX6_NITGG
SNF7-domain-containing protein
SNF7-domain-containing protein {ECO:0000313|EMBL:AFU57507.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
13_1_40cm_4_scaffold_93_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9012..9551
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57508.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9638..10867
DNA (1230bp) protein (410aa)
AAA-type ATPase domain-containing putative archaeal cell division protein Vps4 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IM19_NITGG
AAA-type ATPase domain-containing putative archaeal cell division protein Vps4
AAA-type ATPase domain-containing putative archaeal cell division protein Vps4 {ECO:0000313|EMBL:AFU57509.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitros
13_1_40cm_4_scaffold_93_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10937..13030
DNA (2094bp) protein (698aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
hppA; V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8B6_NITGG
13_1_40cm_4_scaffold_93_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13288..13593
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIE2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57807.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14478..17684
DNA (3207bp) protein (1069aa)
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000313|EMBL:AFU57519.1}; EC=6.1.1.5 {ECO:0000313|EMBL:AFU57519.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae
Isoleucine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM26_NITGG
13_1_40cm_4_scaffold_93_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17870..18205
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICX9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57520.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18240..18518
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8C0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57521.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_93_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18519..18989)
DNA (471bp) protein (157aa)
dusP; dual specificity protein phosphatase (EC:3.1.3.16)
Dual specificity protein phosphatase {ECO:0000313|EMBL:AFU57522.1}; EC=3.1.3.16 {ECO:0000313|EMBL:AFU57522.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitr
Dual specificity protein phosphatase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHX9_NITGG
13_1_40cm_4_scaffold_93_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19062..19265
DNA (204bp) protein (68aa)
Putative zinc-domain protein n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IFB6_NITGG
Zinc-domain protein {ECO:0000313|EMBL:ADK25964.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Ca
zinc-domain-containing protein
13_1_40cm_4_scaffold_93_21

Not on your lists

19613..20329
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN21649.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_93_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


20697..21101
DNA (405bp) protein (135aa)
30S ribosomal protein S6e n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM30_NITGG
30S ribosomal protein S6e {ECO:0000256|SAAS:SAAS00018829}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" so
rps6e; 30S ribosomal protein S6e
13_1_40cm_4_scaffold_93_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


21138..22403
DNA (1266bp) protein (422aa)
Translation initiation factor 2, subunit gamma n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY3_NITGG
eif2g; translation initiation factor 2, subunit gamma
Translation initiation factor 2, subunit gamma {ECO:0000313|EMBL:AFU57525.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_4_scaffold_93_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22405..22809
DNA (405bp) protein (135aa)
PilT domain protein
PilT domain protein {ECO:0000313|EMBL:AIF85071.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrosos
hypothetical protein id=14428619 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_93_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22835..23485
DNA (651bp) protein (217aa)
Zn-dependent hydrolase of the beta-lactamase fold protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHY2_NITGG
Zn-dependent hydrolase
Zn-dependent hydrolase of the beta-lactamase fold protein {ECO:0000313|EMBL:AFU57527.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitroso
13_1_40cm_4_scaffold_93_26
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

23718..24683
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8R9L1_DESM0
glycosyl transferase family 28 Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_4_scaffold_93_27
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24795..25937
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZC9_METCG
Glycosyl transferase family 1 {ECO:0000313|EMBL:KKG27274.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosar
glycosyl transferase, group 1
13_1_40cm_4_scaffold_93_28
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

25956..27059
DNA (1104bp) protein (368aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLR8_THEBM
UDP-N-acetylglucosamine 3-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ADT83845.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus baro
Displaying 28 items

View Taxonomy