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13_1_40cm_4_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1_1
Thermosphaera aggregans, Thermosphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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2..406
DNA (405bp) protein (135aa)
YbaK/prolyl-tRNA synthetase associated domain-containing protein
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:ADG91614.1}; TaxID=633148 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermosphaera.;" source=
13_1_40cm_4_scaffold_1_2
unknown

Not on your lists

421..1290
DNA (870bp) protein (290aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_3
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

1407..2897
DNA (1491bp) protein (497aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq {ECO:0000313|EMBL:ADN50223.1}; EC=3.4.17.19 {ECO:0000313|EMBL:ADN50223.1};; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanis
Carboxypeptidase Taq n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QP52_VULDI
13_1_40cm_4_scaffold_1_4
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

3032..3499
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI000372272B
yqkA; hypothetical protein Tax=RBG_13_Chloroflexi_54_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1_5
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(3496..4461)
DNA (966bp) protein (322aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus A
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthase A n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVP4_9BACT
13_1_40cm_4_scaffold_1_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4574..5896)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0III4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57882.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1_7
unknown

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6278..6634
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_8
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(7163..7687)
DNA (525bp) protein (175aa)
Marine sediment metagenome DNA, contig: S01H1_S41057 Tax=RBG_16_Bathyarchaeota_57_9_curated
13_1_40cm_4_scaffold_1_9
unknown

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comp(7723..7992)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_10
unknown

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8336..9022
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9137..10441
DNA (1305bp) protein (435aa)
Arsenic transporter family protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACH9_CARHZ
putative transporter Tax=RBG_16_Euryarchaeota_68_12_curated
arsenic transporter family protein
13_1_40cm_4_scaffold_1_12
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10694..11365
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MMY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB64581.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
hypothetical protein
13_1_40cm_4_scaffold_1_13
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11374..12297
DNA (924bp) protein (308aa)
Sodium-dependent phosphate transporter n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MU78_9EURY
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:EQB66811.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatale
phosphate permease
13_1_40cm_4_scaffold_1_14
unknown

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12444..12917
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_15
unknown

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13126..13638
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

13961..15220
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAJ5_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1_17
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15366..15686)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFJ5_METPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL16043.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" sour
13_1_40cm_4_scaffold_1_18
unknown

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comp(15799..16119)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_19

Not on your lists

comp(16330..17334)
DNA (1005bp) protein (335aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QLM5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKA49223.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
CorA family protein
13_1_40cm_4_scaffold_1_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

17879..21091
DNA (3213bp) protein (1071aa)
Isoleucine--tRNA ligase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWG0_THEPD
isoleucyl-tRNA synthetase Tax=RBG_16_Bathyarchaeota_48_13_curated
ileS; isoleucyl-tRNA synthetase
13_1_40cm_4_scaffold_1_21
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21167..21649
DNA (483bp) protein (161aa)
Histidine triad (HIT) family hydrolase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74FS6_GEOSL
histidine triad (HIT) protein Tax=GWB2_Geobacteraceae_52_12_curated
histidine triad (HIT) family hydrolase
13_1_40cm_4_scaffold_1_22
unknown

Not on your lists

21711..23519
DNA (1809bp) protein (603aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

23626..25335
DNA (1710bp) protein (570aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI000379BBEA
frdA; fumarate reductase flavoprotein subunit frdA
13_1_40cm_4_scaffold_1_24

Not on your lists

25339..26085
DNA (747bp) protein (249aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
Putative fumarate reductase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WPE9_9NOCA
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:AKA59474.1}; TaxID=1630016 species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
13_1_40cm_4_scaffold_1_25
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26087..26482
DNA (396bp) protein (132aa)
Fumarate reductase subunit C n=13 Tax=Actinobacillus pleuropneumoniae RepID=A3N2H5_ACTP2
fumarate reductase subunit C; K00246 fumarate reductase subunit C Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
frdC; fumarate reductase subunit C
13_1_40cm_4_scaffold_1_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

26479..26898
DNA (420bp) protein (140aa)
fumarate reductase subunit D; K00247 fumarate reductase subunit D Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_1_27
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

27042..27413
DNA (372bp) protein (124aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=391009 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Ther
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LP99_THEM4
alkylhydroperoxidase
13_1_40cm_4_scaffold_1_28
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

27660..28601
DNA (942bp) protein (314aa)
IlvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TUX5_METKA
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AAM02840.1}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyr
13_1_40cm_4_scaffold_1_29
unknown

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comp(28614..29024)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_1_30
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(29028..29489)
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:CCJ35050.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
hypothetical protein
Displaying items 1-30 of 78 in total

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