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13_1_40cm_4_scaffold_1917

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1917_1
unknown

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2..253
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_1917_2
RBG_16_Archaea_50_20_curated, Archaea

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250..495
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_1917_3
RBG_16_Archaea_50_20_curated, Archaea

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519..833
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_1917_4
R_OP11_43_14, Microgenomates, Bacteria

Not on your lists

comp(830..1237)
DNA (408bp) protein (136aa)
similar to HD domain containing 2 (predicted); K07023 putative hydrolases of HD superfamily Tax=RIFCSPLOWO2_01_FULL_OP11_43_14_curated
13_1_40cm_4_scaffold_1917_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1412..1648
DNA (237bp) protein (79aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_1917_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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1685..1882
DNA (198bp) protein (66aa)
Marine sediment metagenome DNA, contig: S06H3_L03387 Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_40cm_4_scaffold_1917_7
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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2360..2896
DNA (537bp) protein (179aa)
Tyrosine recombinase XerC n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX42_HALOH
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
phage integrase family protein
13_1_40cm_4_scaffold_1917_8
unknown

Not on your lists

3163..3447
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_1917_9
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(3444..3974)
DNA (531bp) protein (177aa)
cytidyltransferase (EC:2.7.7.3) Tax=RBG_16_Bathyarchaeota_57_9_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase id=3283813 bin=GWC2_ACD39_50_8 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC2_ACD39_50_8 organism_group=ACD39
13_1_40cm_4_scaffold_1917_trna_1
unknown

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comp(4146..4280)
DNA (135bp)
transferRNA
13_1_40cm_4_scaffold_1917_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

4438..5412
DNA (975bp) protein (325aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
tfb1; transcription initiation factor IIB
13_1_40cm_4_scaffold_1917_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

6133..6378
DNA (246bp) protein (82aa)
Protein translation factor SUI1 homolog n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3C4_9ARCH
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor SUI1
13_1_40cm_4_scaffold_1917_12
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(6611..7570)
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
dTDP-glucose 4,6-dehydratase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1M1_GRAMM
dTDP-glucose 4,6-dehydratase
13_1_40cm_4_scaffold_1917_13
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

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comp(7567..8220)
DNA (654bp) protein (218aa)
Nucleotidyl transferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MDH4_CALMQ
nucleotidyl transferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
nucleotidyl transferase
13_1_40cm_4_scaffold_1917_14
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

8659..8919
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
Uncharacterized protein {ECO:0000313|EMBL:AKG39224.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
hypothetical protein
13_1_40cm_4_scaffold_1917_15
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8973..9839)
DNA (867bp) protein (289aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source
apbA; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TAP9_9EURY
13_1_40cm_4_scaffold_1917_16
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9898..10767)
DNA (870bp) protein (290aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_16_Deltaproteobacteria_50_11_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=1 Tax=Heliobacillus mobilis RepID=Q8GDR8_HELMO
3-methyl-2-oxobutanoate hydroxymethyltransferase
13_1_40cm_4_scaffold_1917_17
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(10770..11768)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QUY7_VULDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN49990.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
Displaying 18 items

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