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13_1_40cm_4_scaffold_2028

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2028_1

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comp(3..485)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00035DA9DC
Uncharacterized protein {ECO:0000313|EMBL:AKA48223.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
peptidase M1, membrane alanine aminopeptidase
13_1_40cm_4_scaffold_2028_2
Sulfolobus tokodaii, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(556..1974)
DNA (1419bp) protein (473aa)
Probable aminopeptidase 2; EC=3.4.11.-;; TaxID=273063 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus tokodaii (strain DSM 16993 / JCM 1054
Probable aminopeptidase 2 n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=APE2_SULTO
aminopeptidase
13_1_40cm_4_scaffold_2028_3
unknown

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comp(2074..2373)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_2028_4
unknown

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comp(2465..2809)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_4_scaffold_2028_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2822..3538)
DNA (717bp) protein (239aa)
Putative RecA-superfamily ATPases implicated in signal transduction n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8T9_METCZ
RecA-superfamily ATPase possibly involved in signal transduction
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:AIF84415.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
13_1_40cm_4_scaffold_2028_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(3661..3960)
DNA (300bp) protein (100aa)
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_2028_7
unknown

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comp(3957..4373)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_4_scaffold_2028_8
unknown

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4549..4959
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_2028_9
unknown

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comp(5026..5604)
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_40cm_4_scaffold_2028_10
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(6159..7385)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LBS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65272.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
hypothetical protein
13_1_40cm_4_scaffold_2028_11

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comp(7543..8637)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LPU0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKA48539.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ABC-2 type transporter
13_1_40cm_4_scaffold_2028_12

Not on your lists

comp(8649..9611)
DNA (963bp) protein (321aa)
ABC transporter ATP-binding protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C1H9_9ZZZZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQD60000.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metageno
ABC transporter-like protein
13_1_40cm_4_scaffold_2028_13
uncultured marine crenarchaeote HF4000_APKG7F19, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9729..10127)
DNA (399bp) protein (133aa)
Putative glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG7F19 RepID=B3T9Q8_9ARCH
Putative glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein {ECO:0000313|EMBL:ABZ09317.1}; TaxID=455601 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;
13_1_40cm_4_scaffold_2028_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10284..10937
DNA (654bp) protein (218aa)
ERCC4 domain-containing protein; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
ERCC4-type nuclease n=1 Tax=uncultured Acidilobus sp. JCHS RepID=V4JIG5_9CREN
Repair endonuclease XPF
13_1_40cm_4_scaffold_2028_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10944..11558
DNA (615bp) protein (205aa)
hexulose-6-phosphate isomerase (EC:5.-.-.-); K08094 6-phospho-3-hexuloisomerase [EC:5.3.1.27] Tax=RBG_13_Bathyarchaeota_38_9_curated
hexulose-6-phosphate isomerase (EC:5.-.-.-)
Hexulose-6-phosphate isomerase n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DLI7_STAMF
13_1_40cm_4_scaffold_2028_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

11582..12877
DNA (1296bp) protein (432aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC:3.5.4.28); K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] Tax=RBG_16_Archaea_50_20_curated
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7Q3_METSW
13_1_40cm_4_scaffold_2028_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(12851..13540)
DNA (690bp) protein (230aa)
ATP binding protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIS2_9EURY
hypothetical protein; K06927 Tax=RBG_16_Archaea_50_20_curated
putative protein MJ0570
13_1_40cm_4_scaffold_2028_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(13546..15156)
DNA (1611bp) protein (537aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZV79_9CREN
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_2028_19
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(15144..16199)
DNA (1056bp) protein (352aa)
Flap endonuclease 1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RXA5_THEPD
flap structure-specific endonuclease Tax=RBG_13_Bathyarchaeota_52_12_curated
flap endonuclease-1
13_1_40cm_4_scaffold_2028_20
unknown

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comp(16352..16849)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_4_scaffold_2028_21
RBG_16_Archaea_50_20_curated, Archaea

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comp(17711..18391)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI00036687F1
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter permease
13_1_40cm_4_scaffold_2028_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(18468..19310)
DNA (843bp) protein (281aa)
ABC transporter related n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY35_THEPD
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_2028_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(19307..20170)
DNA (864bp) protein (288aa)
Cobalt/nickel ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z3_9ARCH
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_2028_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(20229..21254)
DNA (1026bp) protein (342aa)
Predicted phosphoesterase, DHH family n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKC6_HYPBU
DHH family phosphoesterase; K06881 phosphoesterase RecJ domain-containing protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
DHH family phosphoesterase
13_1_40cm_4_scaffold_2028_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(21266..21631)
DNA (366bp) protein (122aa)
pfdB; prefoldin, subunit beta Tax=RBG_16_Archaea_50_20_curated
prefoldin, chaperonin cofactor; K04798 prefoldin beta subunit id=14427074 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
pfdB; prefoldin, subunit beta
13_1_40cm_4_scaffold_2028_26
RBG_16_Archaea_50_20_curated, Archaea

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comp(21940..22377)
DNA (438bp) protein (146aa)
50S ribosomal protein L37Ae n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AI24_PYRYC
rpl37ae; 50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L37Ae
13_1_40cm_4_scaffold_2028_27
RBG_16_Archaea_50_20_curated, Archaea

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comp(22377..22823)
DNA (447bp) protein (149aa)
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated
exosome complex exonuclease 2
13_1_40cm_4_scaffold_2028_28

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22846..23091
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26D8 RepID=Q5XQ91_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU43675.1}; TaxID=285359 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos26D8.;"
13_1_40cm_4_scaffold_2028_29
RBG_16_Archaea_50_20_curated, Archaea

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comp(23066..23938)
DNA (873bp) protein (291aa)
Exosome complex component Rrp41 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH18_PYRYC
rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=RBG_16_Archaea_50_20_curated
exosome complex exonuclease Rrp41
13_1_40cm_4_scaffold_2028_30
RBG_16_Archaea_50_20_curated, Archaea

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comp(23907..24620)
DNA (714bp) protein (238aa)
Exosome complex component Rrp4 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECM8_PYRF1
KH domain containing protein; K03679 exosome complex component RRP4 Tax=RBG_16_Archaea_50_20_curated
KH domain containing protein
Displaying items 1-30 of 56 in total

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