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13_1_40cm_4_scaffold_2195

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2195_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2..541
DNA (540bp) protein (180aa)
RNA polymerase sigma factor SigA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK4_KORVE
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
sigma 38, RpoS
13_1_40cm_4_scaffold_2195_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(775..2328)
DNA (1554bp) protein (518aa)
Radical SAM domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V42_SOLUE
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABJ86473.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usit
13_1_40cm_4_scaffold_2195_3
unknown

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2839..3147
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_2195_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3370..4251)
DNA (882bp) protein (294aa)
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
XRE family transcriptional regulator id=14627828 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
13_1_40cm_4_scaffold_2195_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

4433..4753
DNA (321bp) protein (107aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein id=14628081 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_2195_6
unknown

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4847..5065
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_2195_7

Not on your lists

5125..5799
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:AHZ45548.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_2195_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

6101..6334
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_1_40cm_4_scaffold_2195_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6858..9269)
DNA (2412bp) protein (804aa)
D-alanyl-D-alanine dipeptidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE43_SINAD
D-alanyl-D-alanine dipeptidase
D-alanyl-D-alanine dipeptidase {ECO:0000313|EMBL:AGA27135.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulispha
13_1_40cm_4_scaffold_2195_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9305..9655)
DNA (351bp) protein (117aa)
penicillin-binding protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
penicillin-binding protein id=24414033 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
beta-lactamase
13_1_40cm_4_scaffold_2195_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(9960..10493)
DNA (534bp) protein (178aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP82_KORVE
anti-sigma regulatory factor, serine/threonine protein kinase Tax=RBG_13_Acidobacteria_68_16_curated
anti-sigma regulatory factor, serine/threonine protein kinase
13_1_40cm_4_scaffold_2195_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10507..10935)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365378B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC80241.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_2195_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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11075..11785
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036A27D1
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
RNA polymerase sigma factor
13_1_40cm_4_scaffold_2195_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12457..13464)
DNA (1008bp) protein (336aa)
Outer membrane adhesin-like protein (Fragment) n=1 Tax=Streptomyces auratus AGR0001 RepID=J1RRB6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CDZ79622.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubi
NHL repeat containing protein
13_1_40cm_4_scaffold_2195_15
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13544..14899
DNA (1356bp) protein (452aa)
Integrase family protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVL7_ACISM
integrase
Integrase family protein {ECO:0000313|EMBL:ADW69546.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATC
13_1_40cm_4_scaffold_2195_trna_1
unknown

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comp(14959..15031)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_2195_16
unknown

Not on your lists

15303..15554
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_2195_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15641..16576)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA79_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93146.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2195_18
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(16587..17249)
DNA (663bp) protein (221aa)
id=12554563 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554563 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_4_scaffold_2195_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17388..19079
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371A1F8
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ACY48622.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
13_1_40cm_4_scaffold_2195_20
unknown

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comp(19244..19582)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_2195_21
bacterium UASB14, Bacteria

Not on your lists

19621..20472
DNA (852bp) protein (284aa)
thiopurine S-methyltransferase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483D48
Thiopurine S-methyltransferase, putative {ECO:0000313|EMBL:GAK51173.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
type 12 methyltransferase
13_1_40cm_4_scaffold_2195_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(20482..20979)
DNA (498bp) protein (166aa)
putative alpha/beta hydrolase (EC:3.7.1.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=G3CRC8_9ZZZZ
alpha/beta hydrolase
Displaying 23 items

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